RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 CEACAM7Q14002 265 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 DAZAP2Q15038 168 aaPredicted RBP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 LIN52Q52LA3 116 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 GCNT6Q5T4J0 391 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 OR2A2Q6IF42 318 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 REEP3Q6NUK4 255 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TFAP2EQ6VUC0 442 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 WDR88Q6ZMY6 472 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 GRINAQ7Z429 371 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 NET1Q7Z628 596 aaPredicted RBP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TMEM200AQ86VY9 491 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 CDC20BQ86Y33 519 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 PEX5LQ8IYB4 626 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 GABRG1Q8N1C3 465 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 CADM2Q8N3J6 435 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TMEM99Q8N816 258 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 ZIC4Q8N9L1 334 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 SMYD1Q8NB12 490 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 OR6K3Q8NGY3 331 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 OR10A6Q8NH74 314 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 BBS10Q8TAM1 723 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 OIT3Q8WWZ8 545 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TMEM234Q8WY98 164 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 PMM1Q92871 262 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TAAR8Q969N4 342 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 CPNE4Q96A23 557 aaPredicted RBP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TAMM41Q96BW9 452 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 DTNBP1Q96EV8 351 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF583Q96ND8 569 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 PTDSS2Q9BVG9 487 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 KLHL4Q9C0H6 718 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 MYLK2Q9H1R3 596 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 PIGMQ9H3S5 423 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TMEM38AQ9H6F2 299 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 PLEKHF2Q9H8W4 249 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 TMEM45AQ9NWC5 275 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 CMTM6Q9NX76 183 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 C6orf203Q9P0P8 240 aaPredicted RBP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 ITGB1BP2Q9UKP3 347 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 ZDHHC8Q9ULC8 765 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 PROCRQ9UNN8 238 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 NDUFAF1Q9Y375 327 aa4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 NIPBLQ6KC79 2804 aaeCLIP4.22□□□□□ -1.73
EXOSC3-204ENST00000465860 SVEP1Q4LDE5 3571 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 IGKV3D-15A0A087WSY6 115 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 A0A1B0GWA3 101 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 A0A1W2PR80 420 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 C5orf58C9J3I9 102 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 FTCDNL1E5RQL4 147 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 H0YIZ8 118 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 M0QX08 132 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 M0R3H8 397 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 NME4O00746 187 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 SHOX2O60902 331 aaPredicted RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 LYZL6O75951 148 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 JTBO76095 146 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 NXPH3O95157 252 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 LGI1O95970 557 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 HPRP00739 348 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 PLGP00747 810 aaPredicted RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 ADAP00813 363 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 YES1P07947 543 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 TROVE2P10155 538 aaKnown RBP eCLIP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 FCGR2AP12318 317 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 COX4I1P13073 169 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 POU2F1P14859 743 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 CBLP22681 906 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 IGHV1-2P23083 117 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 MPGP29372 298 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 PRKAR1BP31321 381 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 MAGEA8P43361 318 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 RPS5P46782 204 aaKnown RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 OR3A2P47893 321 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 KCNJ5P48544 419 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF134P52741 427 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 IST1P53990 364 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 CDH12P55289 794 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 CTBP2P56545 445 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 OR2B6P58173 313 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 LTBQ06643 244 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 KLF9Q13886 244 aaPredicted RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC17A1Q14916 467 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 LARS2Q15031 903 aaKnown RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 OR1Q1Q15612 314 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 OR7A5Q15622 319 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 NRF1Q16656 503 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 CYP51A1Q16850 503 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 TRMT5Q32P41 509 aaKnown RBP4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 PDSS1Q5T2R2 415 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 PRAMEF8Q5VWM4 474 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 PRAMEF7Q5VXH5 474 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 METTL21CQ5VZV1 264 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 WBP2NLQ6ICG8 309 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 C11orf87Q6NUJ2 197 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 DHRS4L2Q6PKH6 230 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 TMEM108Q6UXF1 575 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 LINGO2Q7L985 606 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 KDM8Q8N371 416 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 PRR18Q8N4B5 295 aa4.21□□□□□ -1.74
EXOSC3-204ENST00000465860 OR52E4Q8NGH9 312 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms