RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 DPY19L2P2Q6ZN68 376 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 AAED1Q7RTV5 226 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 TUSC5Q8IXB3 177 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 OR13C2Q8NGS9 318 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 TEX47Q8TBZ9 253 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 APH1AQ96BI3 265 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 TNFRSF13CQ96RJ3 184 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 SMR3AQ99954 134 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 PRRG3Q9BZD7 231 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 VCX3BQ9H321 246 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 B3GAT2Q9NPZ5 323 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 PAPOLBQ9NRJ5 636 aaKnown RBP15.43■□□□□ 0.06
CPSF4-209ENST00000465132 GRHPRQ9UBQ7 328 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 FLVCR1Q9Y5Y0 555 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 TRAV27A0A087WT01 109 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 H3BN98 237 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 XKRYO14609 159 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 CDC42EP2O14613 210 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 IMPA2O14732 288 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 PTP4A3O75365 173 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 SLC43A1O75387 559 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 TNFSF13O75888 250 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 KRT33AO76009 404 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 HPRP00739 348 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 CD14P08571 375 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 CD8BP10966 210 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 NKX6-1P78426 367 aaPredicted RBP15.42■□□□□ 0.06
CPSF4-209ENST00000465132 HMBOX1Q6NT76 420 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 FAHD1Q6P587 224 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 ZNF620Q6ZNG0 422 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 SLC35D2Q76EJ3 337 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 TMEM179BQ7Z7N9 219 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 CXorf67Q86X51 503 aaPredicted RBP15.42■□□□□ 0.06
CPSF4-209ENST00000465132 PARP8Q8N3A8 854 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 POMGNT2Q8NAT1 580 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 GPX7Q96SL4 187 aaPredicted RBP15.42■□□□□ 0.06
CPSF4-209ENST00000465132 OR52D1Q9H346 318 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 TXNIPQ9H3M7 391 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 PLSCR4Q9NRQ2 329 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 TBC1D23Q9NUY8 699 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 IL20Q9NYY1 176 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 NDRG3Q9UGV2 375 aa15.42■□□□□ 0.06
CPSF4-209ENST00000465132 RRP15Q9Y3B9 282 aaKnown RBP15.42■□□□□ 0.06
CPSF4-209ENST00000465132 SAC3D1A6NKF1 404 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 MSTNO14793 375 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 CASKO14936 926 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 AHCYL1O43865 530 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 INHBBP09529 407 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 OSMP13725 252 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 FUT4P22083 530 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 IGFBP5P24593 272 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 NOS3P29474 1203 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 CTXN1P60606 82 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 ESRRGP62508 458 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 SIRPAP78324 504 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 LSM11P83369 360 aaKnown RBP eCLIP15.41■□□□□ 0.06
CPSF4-209ENST00000465132 SLC34A1Q06495 639 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 LAPTM4AQ15012 233 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 GUSBP1Q15486 140 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 SHEQ5VZ18 495 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 CASP12Q6UXS9 341 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 ZBTB49Q6ZSB9 765 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 BEND4Q6ZU67 534 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 Q71RC1 249 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-209ENST00000465132 PACRGLQ8N7B6 248 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 OR6X1Q8NH79 312 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 IFT27Q9BW83 186 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 RNPEPL1Q9HAU8 725 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 B3GAT1Q9P2W7 334 aa15.41■□□□□ 0.06
CPSF4-209ENST00000465132 ZNF814B7Z6K7 855 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 MGRN1O60291 552 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 SERPINI2O75830 405 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 IGHG1P01857 330 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 IGHMP01871 453 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 F13BP05160 661 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 IFNGR1P15260 489 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 PRKACGP22612 351 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 KIR2DL2P43627 348 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-209ENST00000465132 OR3A2P47893 321 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 ALDH3A2P51648 485 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 CLDN17P56750 224 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 RPL27P61353 136 aaKnown RBP15.4■□□□□ 0.06
CPSF4-209ENST00000465132 ITGADQ13349 1161 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 DAG1Q14118 895 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 TRIP10Q15642 601 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 ADCK1Q86TW2 530 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 EPHX4Q8IUS5 362 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 KDM8Q8N371 416 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 OR2T33Q8NG76 320 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 ZNF566Q969W8 418 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 SLC25A44Q96H78 314 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-209ENST00000465132 LRR1Q96L50 414 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 CIB1Q99828 191 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 USB1Q9BQ65 265 aaKnown RBP15.4■□□□□ 0.06
CPSF4-209ENST00000465132 NRIP3Q9NQ35 241 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 USE1Q9NZ43 259 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 UPB1Q9UBR1 384 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 SEC14L4Q9UDX3 406 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 CLEC4AQ9UMR7 237 aa15.4■□□□□ 0.06
CPSF4-209ENST00000465132 ARPC3O15145 178 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms