RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 RETREG3Q86VR2 466 aa13.34□□□□□ -0.27
HOXB3-204ENST00000465120 WDFY1Q8IWB7 410 aa13.34□□□□□ -0.27
HOXB3-204ENST00000465120 DPP10Q8N608 796 aa13.34□□□□□ -0.27
HOXB3-204ENST00000465120 GPR32P1Q8NGA4 272 aa13.34□□□□□ -0.27
HOXB3-204ENST00000465120 OR10A6Q8NH74 314 aa13.34□□□□□ -0.27
HOXB3-204ENST00000465120 ADAMTS16Q8TE57 1224 aa13.34□□□□□ -0.27
HOXB3-204ENST00000465120 UBASH3BQ8TF42 649 aa13.34□□□□□ -0.27
HOXB3-204ENST00000465120 MALRD1Q5VYJ5 2156 aa13.34□□□□□ -0.27
HOXB3-204ENST00000465120 TRAPPC13A5PLN9 417 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 LYNX1G3V0Z9 82 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 PATE4P0C8F1 98 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 LYNX1P0DP58 116 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 ZNF14P17017 642 aaPredicted RBP13.33□□□□□ -0.28
HOXB3-204ENST00000465120 TCN1P20061 433 aaPredicted RBP13.33□□□□□ -0.28
HOXB3-204ENST00000465120 CHN2P52757 468 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 MELKQ14680 651 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 RAB39AQ14964 217 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 ZNF74Q16587 644 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 NHLRC1Q6VVB1 395 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 HDXQ7Z353 690 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 PIWIL3Q7Z3Z3 882 aaKnown RBP13.33□□□□□ -0.28
HOXB3-204ENST00000465120 ZNF786Q8N393 782 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 LRRC17Q8N6Y2 441 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 OR4D11Q8NGI4 311 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 ZNF566Q969W8 418 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 SNX18Q96RF0 628 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 SYT3Q9BQG1 590 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.28
HOXB3-204ENST00000465120 DENND2DQ9H6A0 471 aaPredicted RBP13.33□□□□□ -0.28
HOXB3-204ENST00000465120 KAT8Q9H7Z6 458 aaKnown RBP13.33□□□□□ -0.28
HOXB3-204ENST00000465120 RNF121Q9H920 327 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 GLTPQ9NZD2 209 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 REV1Q9UBZ9 1251 aa13.33□□□□□ -0.28
HOXB3-204ENST00000465120 BLOC1S5-TXNDC5H3BN57 136 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 M0R233 179 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 SYNGR3O43761 229 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 ENTPD5O75356 428 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 FARS2O95363 451 aaKnown RBP13.32□□□□□ -0.28
HOXB3-204ENST00000465120 ZNF35P13682 527 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 GIFP27352 417 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 APEX1P27695 318 aaKnown RBP13.32□□□□□ -0.28
HOXB3-204ENST00000465120 PCGF2P35227 344 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 GLRXP35754 106 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 RPS23P62266 143 aaKnown RBP13.32□□□□□ -0.28
HOXB3-204ENST00000465120 CYLC2Q14093 348 aaPredicted RBP13.32□□□□□ -0.28
HOXB3-204ENST00000465120 WDR88Q6ZMY6 472 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 ZNF627Q7L945 461 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 NANOGNBQ7Z5D8 188 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 SKA3Q8IX90 412 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 SLC22A24Q8N4F4 322 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 OR6X1Q8NH79 312 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 TSPEARQ8WU66 669 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 RASSF5Q8WWW0 418 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 TMEM54Q969K7 222 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 MRPL24Q96A35 216 aaKnown RBP13.32□□□□□ -0.28
HOXB3-204ENST00000465120 TAMM41Q96BW9 452 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 MPP4Q96JB8 637 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 TAS2R5Q9NYW4 299 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 DUSP13Q9UII6 198 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 ZNF229Q9UJW7 825 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 FBXL3Q9UKT7 428 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 FZR1Q9UM11 496 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 SH3GLB1Q9Y371 365 aa13.32□□□□□ -0.28
HOXB3-204ENST00000465120 EDF1O60869 148 aaKnown RBP13.31□□□□□ -0.28
HOXB3-204ENST00000465120 BCL10O95999 233 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 THY1P04216 161 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 OR8G3PP0DMU2 310 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 H2AFXP16104 143 aaPredicted RBP13.31□□□□□ -0.28
HOXB3-204ENST00000465120 ALDH3B1P43353 468 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 EVX1P49640 407 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 CLRN1P58418 232 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 ZP4Q12836 540 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 VMACQ2NL98 169 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 CR1LQ2VPA4 569 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 MMEL1Q495T6 779 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 STON2Q8WXE9 905 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 SLC25A44Q96H78 314 aaPredicted RBP13.31□□□□□ -0.28
HOXB3-204ENST00000465120 SH3GL1Q99961 368 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 SH3GL3Q99963 347 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 ECSITQ9BQ95 431 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 SIKE1Q9BRV8 207 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 SOX7Q9BT81 388 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 ZNF385DQ9H6B1 395 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 ZNF224Q9NZL3 707 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 FBN3Q75N90 2809 aa13.31□□□□□ -0.28
HOXB3-204ENST00000465120 A0A1W2PPW3 197 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 MCIDASD6RGH6 385 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 DHHO43323 396 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 QDPRP09417 244 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 IL2RGP31785 369 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 SEC24CP53992 1094 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 TAS2R41P59536 307 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 CCNIQ14094 377 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 MAD2L1BPQ15013 274 aaPredicted RBP13.3□□□□□ -0.28
HOXB3-204ENST00000465120 TRIP10Q15642 601 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 MSMPQ1L6U9 139 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 METTL21CQ5VZV1 264 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 NANOGP8Q6NSW7 305 aa13.3□□□□□ -0.28
HOXB3-204ENST00000465120 TMEM53Q6P2H8 277 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms