RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PQLC1Q8N2U9 271 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 C3orf56Q8N813 242 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 MRPL24Q96A35 216 aaKnown RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 SLC25A36Q96CQ1 311 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 NR1H4Q96RI1 486 aaPredicted RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 TAPBPLQ9BX59 468 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 VCXQ9H320 206 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 MTHFD2LQ9H903 347 aaPredicted RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 ZNF275Q9NSD4 429 aaPredicted RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 AIG1Q9NVV5 245 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 ZNF224Q9NZL3 707 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 RASD1Q9Y272 281 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 PCDHB14Q9Y5E9 798 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 A0A0A6YYJ9 748 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 RP2O75695 350 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 HPRP00739 348 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 SAGP10523 405 aaPredicted RBP13.45□□□□□ -0.26
SND1-203ENST00000463020 NR2F1P10589 423 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 GPR6P46095 362 aaPredicted RBP13.45□□□□□ -0.26
SND1-203ENST00000463020 BLMHQ13867 455 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 SMU1Q2TAY7 513 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 WBP2NLQ6ICG8 309 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 COMTD1Q86VU5 262 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 OR52P1PQ8NH57 321 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 FAM216AQ8WUB2 273 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 GCDHQ92947 438 aaPredicted RBP13.45□□□□□ -0.26
SND1-203ENST00000463020 OR2M2Q96R28 347 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 G6PC2Q9NQR9 355 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 ZIM2Q9NZV7 527 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 REV1Q9UBZ9 1251 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 BTNL2Q9UIR0 455 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 ZNF443Q9Y2A4 671 aaPredicted RBP13.45□□□□□ -0.26
SND1-203ENST00000463020 CMAHPQ9Y471 501 aa13.45□□□□□ -0.26
SND1-203ENST00000463020 VWFP04275 2813 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 H3BNX3 289 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 TRAF3IP2O43734 574 aaPredicted RBP13.44□□□□□ -0.26
SND1-203ENST00000463020 SYNGR3O43761 229 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 SLC22A3O75751 556 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 VAMP5O95183 116 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 ERCC1P07992 297 aaPredicted RBP13.44□□□□□ -0.26
SND1-203ENST00000463020 NAT2P11245 290 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 ZNF35P13682 527 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 HLA-DOBP13765 273 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 ETFAP13804 333 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 ZNF14P17017 642 aaPredicted RBP13.44□□□□□ -0.26
SND1-203ENST00000463020 ADRA2CP18825 462 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 EPHA1P21709 976 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 ARR3P36575 388 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 CAPZA2P47755 286 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 SH3BGRP55822 239 aaPredicted RBP13.44□□□□□ -0.26
SND1-203ENST00000463020 PIGFQ07326 219 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 HNRNPA0Q13151 305 aaKnown RBP13.44□□□□□ -0.26
SND1-203ENST00000463020 ALKBH6Q3KRA9 238 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 CARD17Q5XLA6 110 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 FAHD2BQ6P2I3 314 aaPredicted RBP13.44□□□□□ -0.26
SND1-203ENST00000463020 BLOC1S3Q6QNY0 202 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 FUNDC1Q8IVP5 155 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 SPDL1Q96EA4 605 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 FAHD2AQ96GK7 314 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 Q9H521 79 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 LEF1Q9UJU2 399 aaPredicted RBP13.44□□□□□ -0.26
SND1-203ENST00000463020 PCDHB10Q9UN67 800 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 RCE1Q9Y256 329 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 GPR45Q9Y5Y3 372 aa13.44□□□□□ -0.26
SND1-203ENST00000463020 IGKV1D-42A0A075B6H8 117 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 MAGEA13PA6NCF6 341 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 M0R082 166 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 M0R233 179 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 M0R3G1 203 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 ACOT8O14734 319 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 FZD7O75084 574 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 SLC43A1O75387 559 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
SND1-203ENST00000463020 CBLP22681 906 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 S100A3P33764 101 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 POU3F1Q03052 451 aaPredicted RBP13.43□□□□□ -0.26
SND1-203ENST00000463020 FXNQ16595 210 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 GTDC1Q4AE62 458 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 LIN52Q52LA3 116 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 AWAT1Q58HT5 328 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 C8orf82Q6P1X6 216 aaPredicted RBP13.43□□□□□ -0.26
SND1-203ENST00000463020 ZNF621Q6ZSS3 439 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 RNF148Q8N7C7 305 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 ICA1LQ8NDH6 482 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 OR9I1Q8NGQ6 314 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 MFSD8Q8NHS3 518 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 SGMS2Q8NHU3 365 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 FGFBP3Q8TAT2 258 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 ZNF417Q8TAU3 575 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 TAAR8Q969N4 342 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 PANX1Q96RD7 426 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 ZNF587Q96SQ5 575 aaPredicted RBP13.43□□□□□ -0.26
SND1-203ENST00000463020 ZBTB18Q99592 522 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 SLC6A7Q99884 636 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 EMC6Q9BV81 110 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 TMPRSS13Q9BYE2 586 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 MUC13Q9H3R2 512 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 CD300AQ9UGN4 299 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 SCOCQ9UIL1 159 aa13.43□□□□□ -0.26
SND1-203ENST00000463020 FBXO9Q9UK97 447 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms