RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SOX3P41225 446 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 SLC6A8P48029 635 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 IDH2P48735 452 aaKnown RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 SSR4P51571 173 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 CCR4P51679 360 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 TPD52P55327 224 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 MLF1P58340 268 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 ESRRGP62508 458 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 RPP38P78345 283 aaKnown RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 SSBP2P81877 361 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 HSF1Q00613 529 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF117Q03924 483 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 Q0VFX4 171 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 COX10Q12887 443 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 CHAF1BQ13112 559 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 KEAP1Q14145 624 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 TGIF1Q15583 401 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 NTRK2Q16620 822 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF791Q3KP31 576 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 KRT80Q6KB66 452 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 C1orf94Q6P1W5 598 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 TMEM88Q6PEY1 159 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 ULK3Q6PHR2 472 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 OPN5Q6U736 354 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 CBLN3Q6UW01 205 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 UGT2A3Q6UWM9 527 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 MBOAT2Q6ZWT7 520 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 MISPQ8IVT2 679 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 RNF113BQ8IZP6 322 aaKnown RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 C8orf59Q8N0T1 100 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 PARP8Q8N3A8 854 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 DUSP19Q8WTR2 217 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 DNAJA4Q8WW22 397 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 TMEM239Q8WW34 195 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 SPACA9Q96E40 222 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 SH3YL1Q96HL8 342 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 MPP4Q96JB8 637 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 IP6K3Q96PC2 410 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 SIGLEC11Q96RL6 698 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 PRSS27Q9BQR3 290 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 GABARAPL3Q9BY60 117 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 CHODLQ9H9P2 273 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 GPN2Q9H9Y4 310 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 KRCC1Q9NPI7 259 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 G6PC2Q9NQR9 355 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 ENOPH1Q9UHY7 261 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 GPR52Q9Y2T5 361 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 PCDHGB5Q9Y5G0 923 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 GMPPBQ9Y5P6 360 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 PCSK5Q92824 1860 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 SDK2Q58EX2 2172 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 ZFYVE26Q68DK2 2539 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 SPENQ96T58 3664 aaKnown RBP6.58□□□□□ -1.36
UBE4B-204ENST00000462658 MAGEA13PA6NCF6 341 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 C17orf51A8MQB3 221 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 E9PQ18 207 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 TAF4O00268 1085 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 GMFGO60234 142 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 OR6B1O95007 311 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 LYNP07948 512 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 LIPCP11150 499 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 LYL1P12980 280 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 PGCP20142 388 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 GSTM3P21266 225 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 POU1F1P28069 291 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 EPHA2P29317 976 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 RBM34P42696 430 aaKnown RBP6.58□□□□□ -1.36
UBE4B-204ENST00000462658 SLC1A3P43003 542 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 OMPP47874 163 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 PCP4P48539 62 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 P2RX1P51575 399 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 RPS6KA3P51812 740 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 CRISP1P54107 249 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 GAS1P54826 345 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 C17orf67Q0P5P2 114 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 TSPAN31Q12999 210 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 IL18R1Q13478 541 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 KLF9Q13886 244 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-204ENST00000462658 ALG10BQ5I7T1 473 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 ZNF691Q5VV52 312 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 WBP2NLQ6ICG8 309 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 H3F3CQ6NXT2 135 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 TTC33Q6PID6 262 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-204ENST00000462658 IL20RBQ6UXL0 311 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 WDR88Q6ZMY6 472 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 NRMQ8IXM6 262 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 DND1Q8IYX4 353 aaKnown RBP6.58□□□□□ -1.36
UBE4B-204ENST00000462658 CDK20Q8IZL9 346 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 TMEM156Q8N614 296 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 OR10G3Q8NGC4 313 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 OR5W2Q8NH69 310 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 B4GALNT2Q8NHY0 566 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 ZNF563Q8TA94 476 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 WIPF2Q8TF74 440 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-204ENST00000462658 RNF138Q8WVD3 245 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 THAP4Q8WY91 577 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 GPA33Q99795 319 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 HDHD5Q9BXW7 423 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 METTL7AQ9H8H3 244 aa6.58□□□□□ -1.36
UBE4B-204ENST00000462658 PLEKHA2Q9HB19 425 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms