RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PACSIN3Q9UKS6 424 aa5.07□□□□□ -1.6
VPS36-202ENST00000462289 MCTS1Q9ULC4 181 aaKnown RBP5.07□□□□□ -1.6
VPS36-202ENST00000462289 SH3GLB1Q9Y371 365 aa5.07□□□□□ -1.6
VPS36-202ENST00000462289 A0A087WUU8 490 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 MS4A18H0YCH9 400 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 RPL36A-HNRNPH2H7BZ11 118 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 GPR171O14626 319 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 DVL2O14641 736 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 SEC14L5O43304 696 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 DNAJC8O75937 253 aaPredicted RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 GOSR1O95249 250 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 HPRP00739 348 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 IFNW1P05000 195 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 GPIP06744 558 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 YES1P07947 543 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 ZNF26P17031 533 aaPredicted RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 PSMB1P20618 241 aaKnown RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 FPR1P21462 350 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 CXCR1P25024 350 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 EDNRAP25101 427 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 SLC7A1P30825 629 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 MSX2P35548 267 aaPredicted RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 PEX19P40855 299 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 OR1E2P47887 323 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 UGT2B15P54855 530 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 PRKCDQ05655 676 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 ST3GAL3Q11203 375 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 STK11Q15831 433 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 SGCBQ16585 318 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 HIST3H3Q16695 136 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 MS4A18Q3C1V0 323 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 ANKDD1AQ495B1 522 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 LRRC23Q53EV4 343 aaPredicted RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 TM4SF20Q53R12 229 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 TMPRSS11FQ6ZWK6 438 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 ADGRG5Q8IZF4 528 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 GCNT2Q8N0V5 402 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 TMEM123Q8N131 208 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 CADM2Q8N3J6 435 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 TMEM99Q8N816 258 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 OR9K2Q8NGE7 335 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 OR4C15Q8NGM1 316 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 ACOT11Q8WXI4 607 aaPredicted RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 RNASE6Q93091 150 aaKnown RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 INTS12Q96CB8 462 aaKnown RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 NMD3Q96D46 503 aaKnown RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 CLPTM1LQ96KA5 538 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 NSMCE2Q96MF7 247 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 HS6ST2Q96MM7 605 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 MOGAT1Q96PD6 335 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 GPX7Q96SL4 187 aaPredicted RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 EPYCQ99645 322 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 CACYBPQ9HB71 228 aaKnown RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 CHST11Q9NPF2 352 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 C20orf141Q9NUB4 165 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 AURKAIP1Q9NWT8 199 aaPredicted RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 ELOVL5Q9NYP7 299 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 TAS2R5Q9NYW4 299 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 COQ3Q9NZJ6 369 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 ADA2Q9NZK5 511 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 PLEKHB1Q9UF11 243 aaPredicted RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 PFDN2Q9UHV9 154 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 ZNF229Q9UJW7 825 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 SLC7A7Q9UM01 511 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 POMPQ9Y244 141 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 RCE1Q9Y256 329 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 RASD1Q9Y272 281 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 PRRC2AP48634 2157 aaKnown RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 ARFGEF3Q5TH69 2177 aa5.06□□□□□ -1.6
VPS36-202ENST00000462289 CHD3Q12873 2000 aaKnown RBP5.06□□□□□ -1.6
VPS36-202ENST00000462289 SH3PXD2BA1X283 911 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 ARRDC5A6NEK1 342 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 CPSF4LA6NMK7 179 aaKnown RBP5.05□□□□□ -1.6
VPS36-202ENST00000462289 CENPBD1B2RD01 187 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 J3KTA2 159 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 PLPP3O14495 311 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 PTP4A3O75365 173 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 AHSA1O95433 338 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 IGHMP01871 453 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 OPN1LWP04000 364 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 UMPSP11172 480 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 TCEA1P23193 301 aaKnown RBP5.05□□□□□ -1.6
VPS36-202ENST00000462289 LOXP28300 417 aaPredicted RBP5.05□□□□□ -1.6
VPS36-202ENST00000462289 GRPRP30550 384 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 SDHAP31040 664 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 OMPP47874 163 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 RASSF2P50749 326 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 FXYD6P3P58550 94 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 DGCR2P98153 550 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 RASGEF1BQ0VAM2 473 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 TRAM2Q15035 370 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 DAZAP2Q15038 168 aaPredicted RBP5.05□□□□□ -1.6
VPS36-202ENST00000462289 P2RY6Q15077 328 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 SEC23BQ15437 767 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 STAC2Q6ZMT1 411 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 Q6ZT83 130 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 MBOAT2Q6ZWT7 520 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 CREB3L2Q70SY1 520 aa5.05□□□□□ -1.6
VPS36-202ENST00000462289 H1FNTQ75WM6 255 aaPredicted RBP5.05□□□□□ -1.6
VPS36-202ENST00000462289 FAM122BQ7Z309 247 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms