RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 NRIP3Q9NQ35 241 aa12.37□□□□□ -0.43
TIMP1-205ENST00000456754 ASB6Q9NWX5 421 aa12.37□□□□□ -0.43
TIMP1-205ENST00000456754 KLF2Q9Y5W3 355 aaPredicted RBP12.37□□□□□ -0.43
TIMP1-205ENST00000456754 CDH10Q9Y6N8 788 aa12.37□□□□□ -0.43
TIMP1-205ENST00000456754 ARRDC5A6NEK1 342 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 KRT33AO76009 404 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 THBDP07204 575 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 CSNK1A1P48729 337 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 DAP3P51398 398 aaKnown RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 RCN1Q15293 331 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 CEACAM16Q2WEN9 425 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 HIKESHIQ53FT3 197 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 SFRP5Q5T4F7 317 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 OTPQ5XKR4 325 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 ALKBH2Q6NS38 261 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 MEX3BQ6ZN04 569 aaKnown RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 DPY19L2P2Q6ZN68 376 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 BHLHA15Q7RTS1 189 aaPredicted RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 PQLC1Q8N2U9 271 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 GPR137CQ8N3F9 429 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 ATG16L2Q8NAA4 619 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 ACBD4Q8NC06 268 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 MAGEE2Q8TD90 523 aaPredicted RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 ZNF566Q969W8 418 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 NMD3Q96D46 503 aaKnown RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 SLC25A44Q96H78 314 aaPredicted RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 FOXN4Q96NZ1 517 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 WFIKKN1Q96NZ8 548 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 ERMAPQ96PL5 475 aaPredicted RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 GPX7Q96SL4 187 aaPredicted RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 CIB1Q99828 191 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 TSSK6Q9BXA6 273 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 MRPL13Q9BYD1 178 aaKnown RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 LINC00470Q9BZP3 86 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 ACTR6Q9GZN1 396 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 GABARAPL1Q9H0R8 117 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 NELFAQ9H3P2 528 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 FN3KQ9H479 309 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 CRLF2Q9HC73 371 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 TBC1D23Q9NUY8 699 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 ELOVL5Q9NYP7 299 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 GLTPQ9NZD2 209 aa12.36□□□□□ -0.43
TIMP1-205ENST00000456754 TMEFF2Q9UIK5 374 aaPredicted RBP12.36□□□□□ -0.43
TIMP1-205ENST00000456754 ANKHD1Q8IWZ3 2542 aaKnown RBP12.35□□□□□ -0.43
TIMP1-205ENST00000456754 A0A096LPE4 126 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 C16orf97H3BN30 126 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 BHLHE40O14503 412 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ARHGEF9O43307 516 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 AKAP8O43823 692 aaKnown RBP12.35□□□□□ -0.43
TIMP1-205ENST00000456754 POU1F1P28069 291 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 EPHA2P29317 976 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 SLC6A6P31641 620 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 CDKN2AP42771 156 aaKnown RBP12.35□□□□□ -0.43
TIMP1-205ENST00000456754 CLRN1P58418 232 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 TUBA1BP68363 451 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 TUBA4AP68366 448 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ARF1P84077 181 aaKnown RBP12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ITGADQ13349 1161 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 KRR1Q13601 381 aaKnown RBP12.35□□□□□ -0.43
TIMP1-205ENST00000456754 GK3PQ14409 553 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ETFDHQ16134 617 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ANKDD1AQ495B1 522 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 TMEM236Q5W0B7 351 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ZNF787Q6DD87 383 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 CD300LDQ6UXZ3 194 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 TUBA1AQ71U36 451 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 HIPK1Q86Z02 1210 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 DMRTC2Q8IXT2 367 aaPredicted RBP12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ARIH2OSQ8N7S6 290 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 POMGNT2Q8NAT1 580 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 OR4K13Q8NH42 304 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 NSMAFQ92636 917 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 STMN2Q93045 179 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 KISS1RQ969F8 398 aaPredicted RBP12.35□□□□□ -0.43
TIMP1-205ENST00000456754 MCHR2Q969V1 340 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 NRBF2Q96F24 287 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ADAD1Q96M93 576 aaKnown RBP12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ZNF570Q96NI8 536 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 SLC29A1Q99808 456 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ULBP2Q9BZM5 246 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 IL20Q9NYY1 176 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 CRIM1Q9NZV1 1036 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 KIF17Q9P2E2 1029 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 GRHPRQ9UBQ7 328 aa12.35□□□□□ -0.43
TIMP1-205ENST00000456754 NKX1-2Q9UD57 310 aaPredicted RBP12.35□□□□□ -0.43
TIMP1-205ENST00000456754 ZNF503-AS2A6NEH8 195 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 NPIPB13A6NJU9 1138 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 NPIPB4C9JG80 1138 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 ZNF587BE7ETH6 402 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 GPANK1O95872 356 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 IGHG1P01857 330 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 QDPRP09417 244 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 ANXA8P13928 327 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 ANPEPP15144 967 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 HIST1H1CP16403 213 aaKnown RBP12.34□□□□□ -0.43
TIMP1-205ENST00000456754 PSMB1P20618 241 aaKnown RBP12.34□□□□□ -0.43
TIMP1-205ENST00000456754 GSTM3P21266 225 aa12.34□□□□□ -0.43
TIMP1-205ENST00000456754 IL32P24001 234 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms