RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 EEF1A1P5Q5VTE0 462 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 AADACL4Q5VUY2 407 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 OTPQ5XKR4 325 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 ZNF585AQ6P3V2 769 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 PLBD1Q6P4A8 553 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 LYPD4Q6UWN0 246 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 CASP12Q6UXS9 341 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 RPTNQ6XPR3 784 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 ATCAYQ86WG3 371 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 UEVLDQ8IX04 471 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 ARIH2OSQ8N7S6 290 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 OR51L1Q8NGJ5 315 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 TMEM163Q8TC26 289 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 RNF128Q8TEB7 428 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 SARAFQ96BY9 339 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 BBC3Q96PG8 261 aaPredicted RBP9.75□□□□□ -0.85
SCN9A-205ENST00000454569 CITED4Q96RK1 184 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 TRIB1Q96RU8 372 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 BATF3Q9NR55 127 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 CLCF1Q9UBD9 225 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 GRHPRQ9UBQ7 328 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 RASD1Q9Y272 281 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 HSPE1-MOB4S4R3N1 261 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 A0A1W2PRG6 482 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 DNPH1O43598 174 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 TRMUO75648 421 aaKnown RBP9.75□□□□□ -0.85
SCN9A-205ENST00000454569 BCL10O95999 233 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 HMGN1P05114 100 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 APEHP13798 732 aaKnown RBP9.75□□□□□ -0.85
SCN9A-205ENST00000454569 ZNF43P17038 809 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 SLC2A5P22732 501 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 SELENOPP49908 381 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 RPS3AP61247 264 aaKnown RBP9.75□□□□□ -0.85
SCN9A-205ENST00000454569 SNRPGP62308 76 aaKnown RBP9.75□□□□□ -0.85
SCN9A-205ENST00000454569 MVKQ03426 396 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 FMODQ06828 376 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 RASGEF1BQ0VAM2 473 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 KCTD21Q4G0X4 260 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 KRTCAP3Q53RY4 240 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 C6orf141Q5SZD1 244 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 PDSS1Q5T2R2 415 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 CARD17Q5XLA6 110 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 LEG1Q6P5S2 330 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 NCCRP1Q6ZVX7 275 aaPredicted RBP9.75□□□□□ -0.85
SCN9A-205ENST00000454569 TUSC5Q8IXB3 177 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 PM20D2Q8IYS1 436 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 FAM26EQ8N5C1 309 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 C9orf106Q8NAJ2 232 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 SYT14Q8NB59 555 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 OR8J1Q8NGP2 316 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 OTULINQ96BN8 352 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 LRR1Q96L50 414 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 ZNF582Q96NG8 517 aaPredicted RBP9.75□□□□□ -0.85
SCN9A-205ENST00000454569 FOXN4Q96NZ1 517 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 NMNAT2Q9BZQ4 307 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 PAK1IP1Q9NWT1 392 aaPredicted RBP9.75□□□□□ -0.85
SCN9A-205ENST00000454569 ASB6Q9NWX5 421 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 IMPAD1Q9NX62 359 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 FAM215AQ9Y5M1 114 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 NOX1Q9Y5S8 564 aa9.75□□□□□ -0.85
SCN9A-205ENST00000454569 SLC22A23A1A5C7 686 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 CCDC182A6NF36 153 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 IDH3BO43837 385 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 ZNF432O94892 652 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 TOXO94900 526 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 APOL3O95236 402 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 SYNGR4O95473 234 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 TPOP07202 933 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 PYCR1P32322 319 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 SLC16A1P53985 500 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 C1DQ13901 141 aaKnown RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 POU4F3Q15319 338 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 C11orf91Q3C1V1 193 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 ACSF3Q4G176 576 aaPredicted RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 RBM48Q5RL73 367 aaKnown RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 TMEM201Q5SNT2 666 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 CXXC5Q7LFL8 322 aaKnown RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 NUFIP2Q7Z417 695 aaKnown RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 CD163Q86VB7 1156 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 OR6V1Q8N148 313 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 BPIFB6Q8NFQ5 453 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 SMAP2Q8WU79 429 aaPredicted RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 HTRA1Q92743 480 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 KISS1RQ969F8 398 aaPredicted RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 ZNF837Q96EG3 531 aaPredicted RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 SLC38A2Q96QD8 506 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 OR2M2Q96R28 347 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 MRPL13Q9BYD1 178 aaKnown RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 MRPS26Q9BYN8 205 aaKnown RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 NUAK2Q9H093 628 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 SYT4Q9H2B2 425 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 SRA1Q9HD15 236 aaKnown RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 TIGARQ9NQ88 270 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 RPRD1BQ9NQG5 326 aaKnown RBP9.74□□□□□ -0.85
SCN9A-205ENST00000454569 BAIAP2Q9UQB8 552 aa9.74□□□□□ -0.85
SCN9A-205ENST00000454569 ESPL1Q14674 2120 aa9.73□□□□□ -0.85
SCN9A-205ENST00000454569 OR14I1A6ND48 311 aa9.73□□□□□ -0.85
SCN9A-205ENST00000454569 SLC22A20A6NK97 555 aa9.73□□□□□ -0.85
SCN9A-205ENST00000454569 VAMP5O95183 116 aa9.73□□□□□ -0.85
SCN9A-205ENST00000454569 PGA4P0DJD7 388 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms