RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 AMIGO2Q86SJ2 522 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 THOC6Q86W42 341 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SPAG16Q8N0X2 631 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 FBXL6Q8N531 539 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 BEND7Q8N7W2 519 aaPredicted RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 NAT16Q8N8M0 369 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 OR10A7Q8NGE5 316 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 OR9I1Q8NGQ6 314 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 UBE2E3Q969T4 207 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 BIRC7Q96CA5 298 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF251Q9BRH9 671 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 C1orf50Q9BV19 199 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 MAP1LC3CQ9BXW4 147 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 PLA2G2FQ9BZM2 168 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ULBP2Q9BZM5 246 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 EQTNQ9NQ60 294 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 CYSLTR2Q9NS75 346 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 FTSJ1Q9UET6 329 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 PSORS1C1Q9UIG5 152 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 RNF11Q9Y3C5 154 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 OR10H1Q9Y4A9 318 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 EFCAB10A6NFE3 127 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 PRSS46E5RG02 174 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 PPIAL4DF5H284 164 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 IGLV3-19P01714 112 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 CD5P06127 495 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 RBMS1P29558 406 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 RPL3P39023 403 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 BLKP51451 505 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 PGDP52209 483 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 CST6Q15828 149 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 EIF2S3LQ2VIR3 472 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 CHRFAM7AQ494W8 412 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SPIN4Q56A73 249 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 AGTRAPQ6RW13 159 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 TMEM107Q6UX40 140 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SLCO4C1Q6ZQN7 724 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 DET1Q7L5Y6 550 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SLC22A16Q86VW1 577 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ANKRD46Q86W74 232 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SPNS2Q8IVW8 549 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SLC5A8Q8N695 610 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 OR4D10Q8NGI6 311 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SMPDL3BQ92485 455 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 TXNDC15Q96J42 360 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF75AQ96N20 296 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 KXD1Q9BQD3 176 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ATG101Q9BSB4 218 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 DPH7Q9BTV6 452 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 MAGIXQ9H6Y5 334 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 RPF2Q9H7B2 306 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 FBXO8Q9NRD0 319 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 PHPT1Q9NRX4 125 aaPredicted RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 DNAJB12Q9NXW2 375 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 BTNL2Q9UIR0 455 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ACSL5Q9ULC5 683 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF490Q9ULM2 529 aaPredicted RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SLC6A5Q9Y345 797 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 A8MUA0 341 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 LATO43561 262 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 EIF1BO60739 113 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 MPIG6BO95866 241 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 PDYNP01213 254 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 BCKDHAP12694 445 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ZP3P21754 424 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 EIF1P41567 113 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 OR3A1P47881 315 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF134P52741 427 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 CTXN1P60606 82 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 RPS14P62263 151 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ROM1Q03395 351 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 CSTF1Q05048 431 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 MESP2Q0VG99 397 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 IMPG1Q17R60 797 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 RNF151Q2KHN1 245 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 COX19Q49B96 90 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SYTL3Q4VX76 610 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 LY6G6FQ5SQ64 297 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 METRNLQ641Q3 311 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF547Q8IVP9 402 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 WDFY1Q8IWB7 410 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 OR52I2Q8NH67 350 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 UBE2FQ969M7 185 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 KLHDC7BQ96G42 594 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 TEX37Q96LM6 180 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 HIST1H2AAQ96QV6 131 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 DDOQ99489 341 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 TRMT61BQ9BVS5 477 aaKnown RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 C11orf54Q9H0W9 315 aaPredicted RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 Q9N2J8 555 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 RHCGQ9UBD6 479 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 EBF1Q9UH73 591 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 SLC17A4Q9Y2C5 497 aa7.04□□□□□ -1.28
BRCC3-208ENST00000453705 POLR3HQ9Y535 204 aaPredicted RBP7.04□□□□□ -1.28
BRCC3-208ENST00000453705 TRPM6Q9BX84 2022 aa7.03□□□□□ -1.28
BRCC3-208ENST00000453705 LOC100289279A0A1B0GTE1 492 aa7.03□□□□□ -1.28
BRCC3-208ENST00000453705 ATP6AP2A0A1C7CYW4 349 aa7.03□□□□□ -1.28
BRCC3-208ENST00000453705 K7EQS6 105 aa7.03□□□□□ -1.28
BRCC3-208ENST00000453705 KPNA3O00505 521 aaPredicted RBP7.03□□□□□ -1.28
BRCC3-208ENST00000453705 SSX4O60224 188 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms