RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 DAG1Q14118 895 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 MELKQ14680 651 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 CYBRD1Q53TN4 286 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 ZNF627Q7L945 461 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 SPATA21Q7Z572 469 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 ARPINQ7Z6K5 226 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 NKAIN4Q8IVV8 208 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 WDFY1Q8IWB7 410 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 MICU2Q8IYU8 434 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 POU5F2Q8N7G0 328 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 C10orf105Q8TEF2 133 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 TMEM54Q969K7 222 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 SGTBQ96EQ0 304 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 SLC25A44Q96H78 314 aaPredicted RBP13.24□□□□□ -0.29
CHD3-205ENST00000449744 TPD52L3Q96J77 140 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 SORCS2Q96PQ0 1159 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 MEPEQ9NQ76 525 aaPredicted RBP13.24□□□□□ -0.29
CHD3-205ENST00000449744 B3GNT2Q9NY97 397 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 MED31Q9Y3C7 131 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 SPEF1Q9Y4P9 236 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 TLN2Q9Y4G6 2542 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 A0A1W2PRG6 482 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 MCIDASD6RGH6 385 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 hCG_2039718K7EN88 272 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 GPRIN2O60269 458 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 CCDC22O60826 627 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 CRLF1O75462 422 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 ERCC1P07992 297 aaPredicted RBP13.23□□□□□ -0.29
CHD3-205ENST00000449744 THRBP10828 461 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 FUT1P19526 365 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 PPOXP50336 477 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 UGT2B15P54855 530 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 CLRN1P58418 232 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 RAB1AP62820 205 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 LOXL1Q08397 574 aaPredicted RBP13.23□□□□□ -0.29
CHD3-205ENST00000449744 SNTB2Q13425 540 aaKnown RBP13.23□□□□□ -0.29
CHD3-205ENST00000449744 CARTPTQ16568 116 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 KRT80Q6KB66 452 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 PIWIL3Q7Z3Z3 882 aaKnown RBP13.23□□□□□ -0.29
CHD3-205ENST00000449744 PFN4Q8NHR9 129 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 TMEM255BQ8WV15 326 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 TMEM239Q8WW34 195 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 LZICQ8WZA0 190 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 TNFRSF13CQ96RJ3 184 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 PIMREGQ9BSJ6 248 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 RAB1BQ9H0U4 201 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 PLK3Q9H4B4 646 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 DENND2DQ9H6A0 471 aaPredicted RBP13.23□□□□□ -0.29
CHD3-205ENST00000449744 NOX3Q9HBY0 568 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 MYOZ1Q9NP98 299 aaPredicted RBP13.23□□□□□ -0.29
CHD3-205ENST00000449744 FBXL3Q9UKT7 428 aa13.23□□□□□ -0.29
CHD3-205ENST00000449744 DHHO43323 396 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 OR7A10O76100 309 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 FARS2O95363 451 aaKnown RBP13.22□□□□□ -0.29
CHD3-205ENST00000449744 IGHG1P01857 330 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 LSP1P33241 339 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 GIPRP48546 466 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 SELENOWP63302 87 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 ST3GAL3Q11203 375 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 TMEM249Q2WGJ8 235 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 HDDC2Q7Z4H3 204 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 ANKS4BQ8N8V4 417 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 MS4A3Q96HJ5 214 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 DYNLRB1Q9NP97 96 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 INIPQ9NRY2 104 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 CMAHPQ9Y471 501 aa13.22□□□□□ -0.29
CHD3-205ENST00000449744 A0A096LNT2 108 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 SH3PXD2BA1X283 911 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 A8MV72 311 aaPredicted RBP13.21□□□□□ -0.29
CHD3-205ENST00000449744 NDUFS8O00217 210 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 GSTA4O15217 222 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 IGF2P01344 180 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 F13BP05160 661 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 QDPRP09417 244 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 PGA4P0DJD7 388 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 PGA3P0DJD8 388 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 OR8G3PP0DMU2 310 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 COX4I1P13073 169 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 ZNF14P17017 642 aaPredicted RBP13.21□□□□□ -0.29
CHD3-205ENST00000449744 USF1P22415 310 aaPredicted RBP13.21□□□□□ -0.29
CHD3-205ENST00000449744 NR4A1P22736 598 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 DAP3P51398 398 aaKnown RBP13.21□□□□□ -0.29
CHD3-205ENST00000449744 ZNF84P51523 738 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 GALK2Q01415 458 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 RPL18Q07020 188 aaKnown RBP13.21□□□□□ -0.29
CHD3-205ENST00000449744 GKAP1Q5VSY0 366 aaPredicted RBP13.21□□□□□ -0.29
CHD3-205ENST00000449744 LRFN4Q6PJG9 635 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 PRIMA1Q86XR5 153 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 SKA3Q8IX90 412 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 SVOPLQ8N434 492 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 SLC22A24Q8N4F4 322 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 PRRC1Q96M27 445 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 DOK1Q99704 481 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 HOPXQ9BPY8 73 aaPredicted RBP13.21□□□□□ -0.29
CHD3-205ENST00000449744 RNF121Q9H920 327 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 C20orf141Q9NUB4 165 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 TMEM38BQ9NVV0 291 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 CMTM6Q9NX76 183 aa13.21□□□□□ -0.29
CHD3-205ENST00000449744 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.29
CHD3-205ENST00000449744 ARFGEF3Q5TH69 2177 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms