RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 HSD17B8Q92506 261 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 HOXB13Q92826 284 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 GLIPR2Q9H4G4 154 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 MRPL22Q9NWU5 206 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 TPRKBQ9Y3C4 175 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 CEP192Q8TEP8 1941 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 SOCS6O14544 535 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 CRTAPO75718 401 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 OXSR1O95747 527 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ABCD3P28288 659 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 PEX2P28328 305 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 RPS5P46782 204 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 CORO7P57737 925 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 RAC1P63000 192 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 TRAF3Q13114 568 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ACSM3Q53FZ2 586 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 SWT1Q5T5J6 900 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 FAM69AQ5T7M9 428 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC51BQ86UW2 128 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZBTB46Q86UZ6 589 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 MUC15Q8N387 334 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 KCTD12Q96CX2 325 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF700Q9H0M5 742 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 C7orf69Q9H7B7 122 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 DNAJC15Q9Y5T4 150 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 CRYM-AS1A6NIL9 109 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ICOSLGO75144 302 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 FOXH1O75593 365 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 MPZL1O95297 269 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 DBHP09172 617 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 GKN3PP0CG01 181 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 FAM27D1Q5T7N8 215 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 C1orf140Q5VVS0 124 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 VN1R4Q7Z5H5 301 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 MOB3BQ86TA1 216 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMEM251Q8N6I4 163 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR1J1Q8NGS3 322 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 PTDSS2Q9BVG9 487 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZBTB26Q9HCK0 441 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 TVP23BQ9NYZ1 205 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 HAO1Q9UJM8 370 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 PIGLQ9Y2B2 252 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 EDF1O60869 148 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ADAP00813 363 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ADRA2AP08913 450 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ACSM5Q6NUN0 579 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZFP1Q6P2D0 407 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 FAM198BQ6UWH4 519 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 CXXC5Q7LFL8 322 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 TPRA1Q86W33 373 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF433Q8N7K0 673 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 WDR31Q8NA23 367 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 UXS1Q8NBZ7 420 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 UBASH3BQ8TF42 649 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 SIGLEC12Q96PQ1 595 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 ATF6BQ99941 703 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 DHDHQ9UQ10 334 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 GSTK1Q9Y2Q3 226 aa5.1□□□□□ -1.59
CDC42BPA-209ENST00000448940 A0A087WV62 115 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 DAPL1A0PJW8 107 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 UNC119BA6NIH7 251 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF878C9JN71 531 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 E9PLN8 166 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 TNFAIP8O95379 198 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 PIPP12273 146 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 COX7A1P24310 79 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC6A12P48065 614 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 TNFSF10P50591 281 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SQSTM1Q13501 440 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 DGUOKQ16854 277 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 VMACQ2NL98 169 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC35F1Q5T1Q4 408 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 MRPL2Q5T653 305 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 NXNL2Q5VZ03 156 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 C20orf204Q6ZNR8 217 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SHFQ7M4L6 423 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SLC16A11Q8NCK7 471 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR4N2Q8NGD1 307 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 VKORC1Q9BQB6 163 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF416Q9BWM5 594 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZDHHC18Q9NUE0 388 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 EXO1Q9UQ84 846 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 LRRN3E7EW58 273 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SSNA1O43805 119 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 PNPP00491 289 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 FURINP09958 794 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 DBTP11182 482 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 CDK9P50750 372 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 ERVK-25P63136 954 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 CD276Q5ZPR3 534 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 CYP4V2Q6ZWL3 525 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 H1FNTQ75WM6 255 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 FADS6Q8N9I5 356 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 FNDC9Q8TBE3 224 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 SCARF2Q96GP6 870 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 CSF3RQ99062 836 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 AIG1Q9NVV5 245 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 IGHV1-45A0A0A0MS14 117 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 C5orf49A4QMS7 147 aa5.09□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF432O94892 652 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms