RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 OR5F1O95221 314 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 BCL10O95999 233 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 TNFRSF1BP20333 461 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 USF1P22415 310 aaPredicted RBP17.06■□□□□ 0.32
VCP-203ENST00000448530 RBM34P42696 430 aaKnown RBP17.06■□□□□ 0.32
VCP-203ENST00000448530 PTDSS1P48651 473 aaKnown RBP17.06■□□□□ 0.32
VCP-203ENST00000448530 PPOXP50336 477 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 SNTB2Q13425 540 aaKnown RBP17.06■□□□□ 0.32
VCP-203ENST00000448530 LRRC23Q53EV4 343 aaPredicted RBP17.06■□□□□ 0.32
VCP-203ENST00000448530 PIWIL3Q7Z3Z3 882 aaKnown RBP17.06■□□□□ 0.32
VCP-203ENST00000448530 SPATA21Q7Z572 469 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 WDFY1Q8IWB7 410 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 ANKS4BQ8N8V4 417 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 OR2T12Q8NG77 320 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 TMEM54Q969K7 222 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 SLC25A44Q96H78 314 aaPredicted RBP17.06■□□□□ 0.32
VCP-203ENST00000448530 PRSS27Q9BQR3 290 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 PIMREGQ9BSJ6 248 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 DENND2DQ9H6A0 471 aaPredicted RBP17.06■□□□□ 0.32
VCP-203ENST00000448530 NOX3Q9HBY0 568 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 DYNLRB1Q9NP97 96 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 RIMS3Q9UJD0 308 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 FBXL3Q9UKT7 428 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 AP3M1Q9Y2T2 418 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 A0A1W2PRG6 482 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 FAM220BPB1ANY3 271 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 SLC22A2O15244 555 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 SHOX2O60902 331 aaPredicted RBP17.05■□□□□ 0.32
VCP-203ENST00000448530 MT-ND1P03886 318 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 ASAH2BP0C7U1 165 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 IFNA8P32881 189 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 LSP1P33241 339 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 RAB1AP62820 205 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 MELKQ14680 651 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 CYBRD1Q53TN4 286 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 KRT80Q6KB66 452 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 SVOPLQ8N434 492 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 SGTBQ96EQ0 304 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 TPD52L3Q96J77 140 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 CCDC134Q9H6E4 229 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 MEPEQ9NQ76 525 aaPredicted RBP17.05■□□□□ 0.32
VCP-203ENST00000448530 CMAHPQ9Y471 501 aa17.05■□□□□ 0.32
VCP-203ENST00000448530 A0A096LNT2 108 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 LOC390937A0A1W2PQ73 354 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 MCIDASD6RGH6 385 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 FARS2O95363 451 aaKnown RBP17.04■□□□□ 0.32
VCP-203ENST00000448530 IGHG1P01857 330 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 FUT1P19526 365 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 NR4A1P22736 598 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 KDELR2P33947 212 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 OR1E2P47887 323 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 GIPRP48546 466 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 CLRN1P58418 232 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 VLDLRP98155 873 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 GALK2Q01415 458 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 PIN1Q13526 163 aaPredicted RBP17.04■□□□□ 0.32
VCP-203ENST00000448530 GKAP1Q5VSY0 366 aaPredicted RBP17.04■□□□□ 0.32
VCP-203ENST00000448530 HDDC2Q7Z4H3 204 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 ARPINQ7Z6K5 226 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 NKAIN4Q8IVV8 208 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 TMEM255BQ8WV15 326 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 TMEM239Q8WW34 195 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 LZICQ8WZA0 190 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 RCN3Q96D15 328 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 MS4A3Q96HJ5 214 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 ARMCX1Q9P291 453 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 MED31Q9Y3C7 131 aa17.04■□□□□ 0.32
VCP-203ENST00000448530 YLPM1P49750 1951 aaKnown RBP17.03■□□□□ 0.32
VCP-203ENST00000448530 ELOVL7A1L3X0 281 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 SH3PXD2BA1X283 911 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 KIAA1324LA8MWY0 1029 aaPredicted RBP17.03■□□□□ 0.32
VCP-203ENST00000448530 DHHO43323 396 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 OR7A10O76100 309 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 OR8G3PP0DMU2 310 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 THRBP10828 461 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 ZNF14P17017 642 aaPredicted RBP17.03■□□□□ 0.32
VCP-203ENST00000448530 UGT2B15P54855 530 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 LSM11P83369 360 aaKnown RBP eCLIP17.03■□□□□ 0.32
VCP-203ENST00000448530 GGTLC2Q14390 218 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 C6orf52Q5T4I8 152 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 CYB5R2Q6BCY4 276 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 HIPK1Q86Z02 1210 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 MICU2Q8IYU8 434 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 SLC22A24Q8N4F4 322 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 POU5F2Q8N7G0 328 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 ZNF540Q8NDQ6 660 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 PFN4Q8NHR9 129 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 RP9Q8TA86 221 aaKnown RBP17.03■□□□□ 0.32
VCP-203ENST00000448530 MED4Q9NPJ6 270 aa17.03■□□□□ 0.32
VCP-203ENST00000448530 CCDC22O60826 627 aa17.02■□□□□ 0.32
VCP-203ENST00000448530 IGF2P01344 180 aa17.02■□□□□ 0.32
VCP-203ENST00000448530 F13BP05160 661 aa17.02■□□□□ 0.32
VCP-203ENST00000448530 QDPRP09417 244 aa17.02■□□□□ 0.32
VCP-203ENST00000448530 PGA4P0DJD7 388 aa17.02■□□□□ 0.32
VCP-203ENST00000448530 PGA3P0DJD8 388 aa17.02■□□□□ 0.32
VCP-203ENST00000448530 NR4A2P43354 598 aa17.02■□□□□ 0.32
VCP-203ENST00000448530 DAP3P51398 398 aaKnown RBP17.02■□□□□ 0.32
VCP-203ENST00000448530 ZNF84P51523 738 aa17.02■□□□□ 0.32
VCP-203ENST00000448530 RPS23P62266 143 aaKnown RBP17.02■□□□□ 0.32
VCP-203ENST00000448530 RPL18Q07020 188 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms