RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 APOBEC3AP31941 199 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 MSX2P35548 267 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 CAPZA2P47755 286 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 NAAAQ02083 359 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 PRKCDQ05655 676 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 RUNX1T1Q06455 604 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 C11orf71Q6IPW1 123 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 ZNF544Q6NX49 715 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 TBPL2Q6SJ96 375 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 ZNF813Q6ZN06 617 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 MDP1Q86V88 176 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 MYPOPQ86VE0 399 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 NRMQ8IXM6 262 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 MUC15Q8N387 334 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 C18orf12Q96KH6 178 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 SMR3AQ99954 134 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 KATNB1Q9BVA0 655 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 MRPL13Q9BYD1 178 aaKnown RBP11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 GORASP2Q9H8Y8 452 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 NMNAT1Q9HAN9 279 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 INIPQ9NRY2 104 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 CD300AQ9UGN4 299 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 GDF2Q9UK05 429 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 A0A087WUU8 490 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 A0A1W2PRG6 482 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 HTR3EA5X5Y0 456 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 H7C1Q1 480 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 GMNNO75496 209 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 HLA-HP01893 362 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 CRYAAP02489 173 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 QDPRP09417 244 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 INHBBP09529 407 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 B4GALT1P15291 398 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 ACADSP16219 412 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 CALCRP30988 508 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 ARR3P36575 388 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 IDH3GP51553 393 aaPredicted RBP11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 PIGFQ07326 219 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 FXNQ16595 210 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 HIST3H3Q16695 136 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 ZNF730Q6ZMV8 503 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 SKA3Q8IX90 412 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 RNF113BQ8IZP6 322 aaKnown RBP11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 FITM2Q8N6M3 262 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 FAM86B1Q8N7N1 296 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 SYT14Q8NB59 555 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 ASB10Q8WXI3 467 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 ACOT11Q8WXI4 607 aaPredicted RBP11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 C7orf34Q96L11 122 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 FOXB1Q99853 325 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 KCNS3Q9BQ31 491 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 BDH2Q9BUT1 245 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 NOX3Q9HBY0 568 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 MOV10Q9HCE1 1003 aaKnown RBP11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 ZNF224Q9NZL3 707 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 NDUFAF4Q9P032 175 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 HIF3AQ9Y2N7 669 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 ACANP16112 2415 aa11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 ZNF469Q96JG9 3925 aaPredicted RBP11.07□□□□□ -0.64
PRPF40A-203ENST00000448428 ARFGEF3Q5TH69 2177 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 EFCAB9A8MZ26 197 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 MCIDASD6RGH6 385 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 DHHO43323 396 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 TRMUO75648 421 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 FAM107AO95990 144 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 IGHV4-39P01824 125 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 IGHG1P01857 330 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 SAGP10523 405 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 CD79AP11912 226 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 DAP3P51398 398 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 CLRN1P58418 232 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 MYBPC1Q00872 1141 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 HGFACQ04756 655 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 NPRL3Q12980 569 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 FHL1Q13642 323 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 KRT72Q14CN4 511 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 GSG1Q2KHT4 349 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 MST1LQ2TV78 715 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 ALG10Q5BKT4 473 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 SAMD4BQ5PRF9 694 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 ARMC4Q5T2S8 1044 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 GKAP1Q5VSY0 366 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 MBOAT2Q6ZWT7 520 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 PIWIL3Q7Z3Z3 882 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 CYP4Z1Q86W10 505 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 DEFB107AQ8IZN7 70 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 OR51A7Q8NH64 312 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 FGFBP3Q8TAT2 258 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 SLC7A13Q8TCU3 470 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 MCHR2Q969V1 340 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 ZNF75AQ96N20 296 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 TNFRSF13CQ96RJ3 184 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 ZNF347Q96SE7 839 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 SEPHS2Q99611 448 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 CACNG6Q9BXT2 260 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 TXNIPQ9H3M7 391 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 FAM53CQ9NYF3 392 aa11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 SAMD4AQ9UPU9 718 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 FAM32AQ9Y421 112 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-203ENST00000448428 TRAV27A0A087WT01 109 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms