RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 UTP4Q969X6 686 aaKnown RBP12.42□□□□□ -0.42
SSBP3-208ENST00000444533 GTPBP3Q969Y2 492 aaKnown RBP12.42□□□□□ -0.42
SSBP3-208ENST00000444533 NRBF2Q96F24 287 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 DUS3LQ96G46 650 aaKnown RBP12.42□□□□□ -0.42
SSBP3-208ENST00000444533 ZNF570Q96NI8 536 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 WFIKKN1Q96NZ8 548 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 IFT27Q9BW83 186 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 TEX12Q9BXU0 123 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 GPR35Q9HC97 309 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 GLTPQ9NZD2 209 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 AMDHD2Q9Y303 409 aa12.42□□□□□ -0.42
SSBP3-208ENST00000444533 OR5H1A6NKK0 313 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ZNF99A8MXY4 864 aaPredicted RBP12.41□□□□□ -0.42
SSBP3-208ENST00000444533 RPL36A-HNRNPH2H7BZ11 118 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 FARS2O95363 451 aaKnown RBP12.41□□□□□ -0.42
SSBP3-208ENST00000444533 GASTP01350 101 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ITGA5P08648 1049 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ANXA8P13928 327 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 EDNRAP25101 427 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 SDHAP31040 664 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 GSSP48637 474 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 NR1H2P55055 460 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ERVK-25P63136 954 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 PPA1Q15181 289 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 TSC22D1Q15714 1073 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ATP6AP1Q15904 470 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 CEACAM16Q2WEN9 425 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 RFX4Q33E94 735 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ZNF787Q6DD87 383 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 KLHL17Q6TDP4 642 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 TMEM200AQ86VY9 491 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 JAZF1Q86VZ6 243 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 HIPK1Q86Z02 1210 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 WFDC8Q8IUA0 241 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ZDHHC13Q8IUH4 622 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 CCDC36Q8IYA8 594 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ARIH2OSQ8N7S6 290 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 SYT14Q8NB59 555 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ACBD4Q8NC06 268 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 NANOS1Q8WY41 292 aaKnown RBP12.41□□□□□ -0.42
SSBP3-208ENST00000444533 SLCO4A1Q96BD0 722 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 C14orf79Q96F83 325 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ALG12Q9BV10 488 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 DGCR6LQ9BY27 220 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 KCNN2Q9H2S1 579 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 OR52D1Q9H346 318 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 OBP2BQ9NPH6 170 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 TBC1D23Q9NUY8 699 aa12.41□□□□□ -0.42
SSBP3-208ENST00000444533 ZNF346Q9UL40 294 aaKnown RBP12.41□□□□□ -0.42
SSBP3-208ENST00000444533 G3V2T6 193 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 H3BN98 237 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 ARHGEF9O43307 516 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 KLF4O43474 513 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 IDH3BO43837 385 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 AHCYL1O43865 530 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 PTP4A3O75365 173 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 TRMUO75648 421 aaKnown RBP12.4□□□□□ -0.42
SSBP3-208ENST00000444533 QDPRP09417 244 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 PGA4P0DJD7 388 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 PGA3P0DJD8 388 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 APEHP13798 732 aaKnown RBP12.4□□□□□ -0.42
SSBP3-208ENST00000444533 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-208ENST00000444533 ZNF23P17027 643 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 CCKARP32238 428 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 CAPZA2P47755 286 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 THEM4Q5T1C6 240 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 SHQ1Q6PI26 577 aaKnown RBP12.4□□□□□ -0.42
SSBP3-208ENST00000444533 ZNF620Q6ZNG0 422 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 RASSF6Q6ZTQ3 369 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 ADCK1Q86TW2 530 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 SVOPLQ8N434 492 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 OR5K1Q8NHB7 308 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 TEX47Q8TBZ9 253 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 PYDC1Q8WXC3 89 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 TMEM54Q969K7 222 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 MUS81Q96NY9 551 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 ERMAPQ96PL5 475 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-208ENST00000444533 GPX7Q96SL4 187 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-208ENST00000444533 FEVQ99581 238 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 ESRP2Q9H6T0 727 aaKnown RBP12.4□□□□□ -0.42
SSBP3-208ENST00000444533 VNN3Q9NY84 501 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 IL20RAQ9UHF4 553 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 EDARQ9UNE0 448 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 BAIAP2Q9UQB8 552 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 IER3IP1Q9Y5U9 82 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 CDH10Q9Y6N8 788 aa12.4□□□□□ -0.42
SSBP3-208ENST00000444533 A6NNC1 897 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 PDLIM1O00151 329 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 IMPA2O14732 288 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 DHHO43323 396 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 MGRN1O60291 552 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 RENP00797 406 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 CRYGSP22914 178 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 IST1P53990 364 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 ARF1P84077 181 aaKnown RBP12.39□□□□□ -0.43
SSBP3-208ENST00000444533 TLE4Q04727 773 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 LGALS3BPQ08380 585 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 KRR1Q13601 381 aaKnown RBP12.39□□□□□ -0.43
SSBP3-208ENST00000444533 DAZAP2Q15038 168 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms