RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 MPIP34949 423 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 RFC3P40938 356 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 GPR1P46091 355 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 POLR2GP62487 172 aaKnown RBP eCLIP7.81□□□□□ -1.16
HPS4-206ENST00000439453 SPEM2Q0P670 501 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 ARHGAP19Q14CB8 494 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 OR1Q1Q15612 314 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 MICBQ29980 383 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 UQCC3Q6UW78 93 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 DNM1P46Q6ZS02 220 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 TMPRSS11FQ6ZWK6 438 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 KRT77Q7Z794 578 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.81□□□□□ -1.16
HPS4-206ENST00000439453 SLC35F2Q8IXU6 374 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 SVBPQ8N300 66 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 SLC16A11Q8NCK7 471 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 OR1M1Q8NGA1 313 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 OR4D10Q8NGI6 311 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 CNN2Q99439 309 aaKnown RBP7.81□□□□□ -1.16
HPS4-206ENST00000439453 TMEM185BQ9H7F4 350 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 MBD2Q9UBB5 411 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 CES1P1Q9UKY3 287 aa7.81□□□□□ -1.16
HPS4-206ENST00000439453 GPRIN2O60269 458 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 TMIGD3P0DMS9 266 aaPredicted RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 F3P13726 295 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 ITPKBP27987 946 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 CCR5P51681 352 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 UBE2IP63279 158 aaKnown RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 EEF1A1P68104 462 aaKnown RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 GUCA2BQ16661 112 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 C4orf46Q504U0 113 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 EIPR1Q53HC9 387 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 LYSMD4Q5XG99 296 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 OR2W3Q7Z3T1 314 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 CBLN2Q8IUK8 224 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 ACOT4Q8N9L9 421 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 OR51L1Q8NGJ5 315 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 OR6N1Q8NGY5 312 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 ASB13Q8WXK3 278 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 ZNF514Q96K75 400 aaPredicted RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 MRI1Q9BV20 369 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 WDR13Q9H1Z4 485 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 FKRPQ9H9S5 495 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 CYB5R1Q9UHQ9 305 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 PCYT1BQ9Y5K3 369 aaPredicted RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 TDRD6O60522 2096 aaKnown RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 TBC1D3EA0A087X179 549 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 TMEM218A2RU14 115 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 H7C417 338 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 ERI3O43414 337 aaKnown RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 LRP3O75074 770 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 TMEM127O75204 238 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 IFNGP01579 166 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 HIST1H1TP22492 207 aaPredicted RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 AGTR1P30556 359 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 LUMP51884 338 aaPredicted RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 TNFRSF17Q02223 184 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 TMEM35AQ53FP2 167 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 MRM1Q6IN84 353 aaKnown RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 SLC48A1Q6P1K1 146 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 SLC23A3Q6PIS1 610 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 CHST6Q9GZX3 395 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 APMAPQ9HDC9 416 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 PRDM9Q9NQV7 894 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 NCDNQ9UBB6 729 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 MTFP1Q9UDX5 166 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 ICAM5Q9UMF0 924 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 A0A1W2PPC4 97 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 KANTRA0A1W2PQU2 76 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 LNP1A1A4G5 178 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 DUXAA6NLW8 204 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 DHPSP49366 369 aaPredicted RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 PPIAP62937 165 aaKnown RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 MANEAQ5SRI9 462 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 JMJD6Q6NYC1 403 aaPredicted RBP7.8□□□□□ -1.16
HPS4-206ENST00000439453 OR52E2Q8NGJ4 325 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 OR14C36Q8NHC7 312 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 DUSP19Q8WTR2 217 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 ZNF75AQ96N20 296 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 ZNF281Q9Y2X9 895 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 MED31Q9Y3C7 131 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 ETV7Q9Y603 341 aa7.8□□□□□ -1.16
HPS4-206ENST00000439453 EP300Q09472 2414 aaPredicted RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 CDX4O14627 284 aaPredicted RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 GDF9O60383 454 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 PAK4O96013 591 aaPredicted RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 GLAP06280 429 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 HSD17B2P37059 387 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 AMZ1Q400G9 498 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 MFSD12Q6NUT3 480 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 FAM111BQ6SJ93 734 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 DND1Q8IYX4 353 aaKnown RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 ARMC10Q8N2F6 343 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 KCNRGQ8N5I3 272 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 POMGNT2Q8NAT1 580 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 SDR9C7Q8NEX9 313 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 OR51S1Q8NGJ8 323 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 OR5K2Q8NHB8 316 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 TNFRSF13CQ96RJ3 184 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 ADAT1Q9BUB4 502 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms