RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 MEMO1Q9Y316 297 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 LRRC42Q9Y546 428 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 KMT2BQ9UMN6 2715 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-202ENST00000439369 COL6A6A6NMZ7 2263 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 TRGV8A0A0C4DH27 118 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 SLC22A23A1A5C7 686 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 KDM4EB2RXH2 506 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-202ENST00000439369 ARHGEF9O43307 516 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 DENRO43583 198 aaKnown RBP11.24□□□□□ -0.61
SCLT1-202ENST00000439369 TOXO94900 526 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 MYF6P23409 242 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 CTSSP25774 331 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 CRABP1P29762 137 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 OPRM1P35372 400 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 OR3A2P47893 321 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 CSNK1A1P48729 337 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 CENPAP49450 140 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 CLRN1P58418 232 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 CRMP1Q14194 572 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 MELKQ14680 651 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 SLC35F1Q5T1Q4 408 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 NIPAL3Q6P499 406 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 PTCHD4Q6ZW05 846 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 ABHD12BQ7Z5M8 362 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-202ENST00000439369 CCDC71Q8IV32 467 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-202ENST00000439369 C20orf196Q8IYI0 205 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 SLC37A3Q8NCC5 494 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 OR52E2Q8NGJ4 325 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 OR2T4Q8NH00 348 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 OR4K13Q8NH42 304 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 RHOXF1Q8NHV9 184 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 HDAC2Q92769 488 aaKnown RBP11.24□□□□□ -0.61
SCLT1-202ENST00000439369 TMEM54Q969K7 222 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 APH1AQ96BI3 265 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 NMD3Q96D46 503 aaKnown RBP11.24□□□□□ -0.61
SCLT1-202ENST00000439369 Q96MT0 163 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 MUS81Q96NY9 551 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 RBP7Q96R05 134 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 DDOQ99489 341 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 NMNAT2Q9BZQ4 307 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 SLCO5A1Q9H2Y9 848 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 PIGMQ9H3S5 423 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 ASB6Q9NWX5 421 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF629Q9UEG4 869 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-202ENST00000439369 FOXD3Q9UJU5 478 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-202ENST00000439369 FKBP7Q9Y680 259 aa11.24□□□□□ -0.61
SCLT1-202ENST00000439369 PRR23D1E9PI22 279 aaPredicted RBP11.23□□□□□ -0.61
SCLT1-202ENST00000439369 RPL36A-HNRNPH2H7BZ11 118 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 PRODHO43272 600 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 PRKYO43930 277 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 TNFSF13O75888 250 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 C1QL1O75973 258 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 PRR23D2P0DMB1 279 aaPredicted RBP11.23□□□□□ -0.61
SCLT1-202ENST00000439369 CD8BP10966 210 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 CDKN2AP42771 156 aaKnown RBP11.23□□□□□ -0.61
SCLT1-202ENST00000439369 KIR2DL2P43627 348 aaPredicted RBP11.23□□□□□ -0.61
SCLT1-202ENST00000439369 BLVRAP53004 296 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 ISL1P61371 349 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 LGALS3BPQ08380 585 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 PMPCAQ10713 525 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 TMED1Q13445 227 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 OCLNQ16625 522 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 LEG1Q6P5S2 330 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 CXXC5Q7LFL8 322 aaKnown RBP11.23□□□□□ -0.61
SCLT1-202ENST00000439369 THAP5Q7Z6K1 395 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 GID4Q8IVV7 300 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF100Q8IYN0 542 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 GCNT2Q8N0V5 402 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 GPR137CQ8N3F9 429 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 TCEANCQ8N8B7 351 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 SDR9C7Q8NEX9 313 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 OR6N1Q8NGY5 312 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 FBLIM1Q8WUP2 373 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 RND1Q92730 232 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 RFKQ969G6 155 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 NMNAT3Q96T66 252 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 EMC6Q9BV81 110 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 RACGAP1Q9H0H5 632 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 PLSCR4Q9NRQ2 329 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 GLTPQ9NZD2 209 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 MALT1Q9UDY8 824 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 CLEC4AQ9UMR7 237 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 MOKQ9UQ07 419 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 RNF6Q9Y252 685 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 IGSF10Q6WRI0 2623 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 GTF3C1Q12789 2109 aa11.23□□□□□ -0.61
SCLT1-202ENST00000439369 SH3D21A4FU49 640 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 OR6C68A6NDL8 312 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 SNTNA6NMZ2 147 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 TLX2O43763 284 aaPredicted RBP11.22□□□□□ -0.61
SCLT1-202ENST00000439369 SLC2A10O95528 541 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 GNAO1P09471 354 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 GABRB1P18505 474 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 NTF4P34130 210 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 SELENOPP49908 381 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 SH3BGRP55822 239 aaPredicted RBP11.22□□□□□ -0.61
SCLT1-202ENST00000439369 CSNK2BP67870 215 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 IL5RAQ01344 420 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 RUNX1T1Q06455 604 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 CD47Q08722 323 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms