RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 TAF13Q15543 124 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 HFEQ30201 348 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 PRRT3Q5FWE3 981 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 UNQ6126/PRO20091Q6UXV3 157 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 LRRTM1Q86UE6 522 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 NSMAFQ92636 917 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 CMTM3Q96MX0 182 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 MFRPQ9BY79 579 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 PITHD1Q9GZP4 211 aaPredicted RBP12.34□□□□□ -0.43
PCNX3-202ENST00000439247 DNTTIP1Q9H147 329 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 SLC25A32Q9H2D1 315 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 TMEM231Q9H6L2 316 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 ASF1BQ9NVP2 202 aa12.34□□□□□ -0.43
PCNX3-202ENST00000439247 P2RX6O15547 441 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 PAK4O96013 591 aaPredicted RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 ANXA2P07355 339 aaKnown RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 RPS4Y1P22090 263 aaKnown RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 MANEAQ5SRI9 462 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 LIPNQ5VXI9 398 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 NKAIN2Q5VXU1 208 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 JMJD6Q6NYC1 403 aaPredicted RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 BEST3Q8N1M1 668 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 EID2Q8N6I1 236 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 CMSS1Q9BQ75 279 aaKnown RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 IFT22Q9H7X7 185 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 STEAP1Q9UHE8 339 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 SERTAD3Q9UJW9 196 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 PCDHB10Q9UN67 800 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 MRPS2Q9Y399 296 aaKnown RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 WASP42768 502 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 KCNJ3P48549 501 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 TMEM205Q6UW68 189 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 MOB3CQ70IA8 216 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 STEAP2Q8NFT2 490 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 OR5T3Q8NGG3 340 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 OR6N1Q8NGY5 312 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 DCTN6O00399 190 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 PRKNO60260 465 aaPredicted RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 GP1BAP07359 652 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 BDKRB2P30411 391 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 RGS19P49795 217 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 GPR85P60893 370 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 NR0B2Q15466 257 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 NNATQ16517 81 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 HAGHLQ6PII5 290 aaPredicted RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 KIRREL2Q6UWL6 708 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 Q7L0L9 218 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 POMGNT2Q8NAT1 580 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 OR1J2Q8NGS2 313 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 OR5AK2Q8NH90 309 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 FOXN4Q96NZ1 517 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 LMF1Q96S06 567 aa12.33□□□□□ -0.44
PCNX3-202ENST00000439247 VRK1Q99986 396 aaPredicted RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 TINAGL1Q9GZM7 467 aaPredicted RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 MRM2Q9UI43 246 aaKnown RBP12.33□□□□□ -0.44
PCNX3-202ENST00000439247 GGT3PA6NGU5 568 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 OR5H14A6NHG9 310 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 OR6C76A6NM76 312 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 XRCC3O43542 346 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 GPRIN2O60269 458 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 ALOX12BO75342 701 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 CTAG2O75638 210 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 AKR7A3O95154 331 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 OR4E1P0C645 316 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 CALCBP10092 127 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 MGMTP16455 207 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 Q499Y3 187 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 DGAT2L6Q6ZPD8 337 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 RAB42Q8N4Z0 105 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 OR2L8Q8NGY9 312 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 RELTQ969Z4 430 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 PPP1R14AQ96A00 147 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 TMEM106AQ96A25 262 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 SRA1Q9HD15 236 aaKnown RBP12.32□□□□□ -0.44
PCNX3-202ENST00000439247 COA4Q9NYJ1 87 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 FGF17O60258 216 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 NDUFB2O95178 105 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 ACAA2P42765 397 aaKnown RBP12.32□□□□□ -0.44
PCNX3-202ENST00000439247 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
PCNX3-202ENST00000439247 PPIAP62937 165 aaKnown RBP12.32□□□□□ -0.44
PCNX3-202ENST00000439247 HNRNPA1L2Q32P51 320 aaKnown RBP12.32□□□□□ -0.44
PCNX3-202ENST00000439247 LEG1Q6P5S2 330 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 GALNT16Q8N428 558 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 FANCFQ9NPI8 374 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 IKZF2Q9UKS7 526 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 ENTPD2Q9Y5L3 495 aa12.32□□□□□ -0.44
PCNX3-202ENST00000439247 DOK2O60496 412 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 UPK3AO75631 287 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 EML2O95834 649 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 PGDP52209 483 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 ILF3Q12906 894 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCNX3-202ENST00000439247 GGTLC2Q14390 218 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 ZNF234Q14588 700 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 OR7A5Q15622 319 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 SLC35F3Q8IY50 421 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 MFSD9Q8NBP5 474 aa12.31□□□□□ -0.44
PCNX3-202ENST00000439247 SMRP1Q8NCR6 262 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms