RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 IFNA8P32881 189 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 SHMT2P34897 504 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CDK9P50750 372 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 PDX1P52945 283 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 LBX1P52954 281 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CDH12P55289 794 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 DLX5P56178 289 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 RANP62826 216 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CDKL1Q00532 357 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TLE4Q04727 773 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TNFRSF9Q07011 255 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CNTN1Q12860 1018 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TRAF3Q13114 568 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 GPR17Q13304 367 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 EMC2Q15006 297 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 RBMS2Q15434 407 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TAL2Q16559 108 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 UPP1Q16831 310 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ATP6V1FQ16864 119 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 RFX4Q33E94 735 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACSM3Q53FZ2 586 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TEX30Q5JUR7 227 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 SPIN3Q5JUX0 258 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACTL10Q5JWF8 245 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 BRMS1LQ5PSV4 323 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 DCAF12Q5T6F0 453 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 HES5Q5TA89 166 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 NIPAL1Q6NVV3 410 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 BTNL3Q6UXE8 466 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 RBMS3Q6XE24 437 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACOT7LQ6ZUV0 252 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ASB18Q6ZVZ8 466 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TSEN54Q7Z6J9 526 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 NT5DC3Q86UY8 548 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 PLA2G4DQ86XP0 818 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 APOBEC3FQ8IUX4 373 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 STK40Q8N2I9 435 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ABHD12Q8N2K0 398 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR2L13Q8N349 312 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 STPG2Q8N412 459 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 KIF2BQ8N4N8 673 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 GBGT1Q8N5D6 347 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 IQCF1Q8N6M8 205 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 NATD1Q8N6N6 113 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 VN1R2Q8NFZ6 395 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR4F17Q8NGA8 305 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR4D9Q8NGE8 314 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR9A4Q8NGU2 314 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR4F5Q8NH21 305 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ACER1Q8TDN7 264 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 SETD7Q8WTS6 366 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 NELFBQ8WX92 580 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 PIK3R3Q92569 461 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 PNPLA2Q96AD5 504 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CCDC126Q96EE4 140 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ABHD8Q96I13 439 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 NOL4LQ96MY1 436 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 SERPINB12Q96P63 405 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR4F4Q96R69 305 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 STACQ99469 402 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TRIM51Q9BSJ1 452 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TMEM109Q9BVC6 243 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 BARHL1Q9BZE3 327 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ULBP1Q9BZM6 244 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZYG11BQ9C0D3 744 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TUBB1Q9H4B7 451 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TRABDQ9H4I3 376 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 KLHL31Q9H511 634 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CAB39LQ9H9S4 337 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 MOV10Q9HCE1 1003 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 RRAGDQ9NQL2 400 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CUTCQ9NTM9 273 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 PARVAQ9NVD7 372 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 DUS2Q9NX74 493 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 BFARQ9NZS9 450 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CCDC59Q9P031 241 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 NYAP2Q9P242 653 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 SMPXQ9UHP9 88 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ZDHHC2Q9UIJ5 367 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 LSM7Q9UK45 103 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 STUB1Q9UNE7 303 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 PSG11Q9UQ72 335 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 DHRS7Q9Y394 339 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 TOP2AP11388 1531 aaKnown RBP3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 ABCB11O95342 1321 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 CEMIPQ8WUJ3 1361 aa3.12□□□□□ -1.91
HMGB1P12-201ENST00000438594 KIR2DL5BA0A0G2JN68 375 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 KIR2DL5BA0A0G2JPC4 375 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 OR5K3A6NET4 321 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 LILRA5A6NI73 299 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 E9PAM4 449 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 F5H768 121 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 FADS1O60427 444 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 NDUFS7O75251 213 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 CTDNEP1O95476 244 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 PLAUP00749 431 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 H1F0P07305 194 aaKnown RBP3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 RHOCP08134 193 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 GSTA1P08263 222 aa3.11□□□□□ -1.91
HMGB1P12-201ENST00000438594 HBQ1P09105 142 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms