RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 CLRN1P58418 232 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 MELKQ14680 651 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 SLC35D3Q5M8T2 416 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 RBM48Q5RL73 367 aaKnown RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 LCN1P1Q5VSP4 162 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 NIPAL3Q6P499 406 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 NPEPL1Q8NDH3 523 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 MBD3L2Q8NHZ7 208 aaPredicted RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 NR1H4Q96RI1 486 aaPredicted RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 IL4I1Q96RQ9 567 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 KCNK17Q96T54 332 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 YTHDF1Q9BYJ9 559 aaKnown RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 B3GAT2Q9NPZ5 323 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 HINT3Q9NQE9 182 aaKnown RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 RASSF1Q9NS23 344 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 MED29Q9NX70 200 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 H2AFY2Q9P0M6 372 aaPredicted RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 NOSIPQ9Y314 301 aaKnown RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 EMC9Q9Y3B6 208 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 FKBP7Q9Y680 259 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 IGSF10Q6WRI0 2623 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 SLC35F4A4IF30 521 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 M0R129 80 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 WBP4O75554 376 aaKnown RBP11.92□□□□□ -0.5
RPE-208ENST00000436630 TRMUO75648 421 aaKnown RBP11.92□□□□□ -0.5
RPE-208ENST00000436630 WISP2O76076 250 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 ZNF432O94892 652 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 SLC2A10O95528 541 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 TGM6O95932 706 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 PGA4P0DJD7 388 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 PGA3P0DJD8 388 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 AGTR1P30556 359 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 TIMP3P35625 211 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 CSNK1A1P48729 337 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 MLLT10P55197 1068 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 CDH11P55287 796 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 CDK5R2Q13319 367 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 STK11Q15831 433 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 C6orf141Q5SZD1 244 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 ZNF362Q5T0B9 420 aaPredicted RBP11.92□□□□□ -0.5
RPE-208ENST00000436630 THEM4Q5T1C6 240 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 RIPPLY2Q5TAB7 128 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 AADACL4Q5VUY2 407 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 PLBD1Q6P4A8 553 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 B3GNT6Q6ZMB0 384 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 AAED1Q7RTV5 226 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 CPOQ8IVL8 374 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 TMEM123Q8N131 208 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 ZIC4Q8N9L1 334 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 APH1BQ8WW43 257 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 ZNF385AQ96PM9 386 aaKnown RBP11.92□□□□□ -0.5
RPE-208ENST00000436630 RBP7Q96R05 134 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 OR2M2Q96R28 347 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 NMNAT3Q96T66 252 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 DDOQ99489 341 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 MRPL13Q9BYD1 178 aaKnown RBP11.92□□□□□ -0.5
RPE-208ENST00000436630 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 RACGAP1Q9H0H5 632 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 ASB6Q9NWX5 421 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 SCN3BQ9NY72 215 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 WARS2Q9UGM6 360 aaKnown RBP11.92□□□□□ -0.5
RPE-208ENST00000436630 ING1Q9UK53 422 aaPredicted RBP11.92□□□□□ -0.5
RPE-208ENST00000436630 MOKQ9UQ07 419 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 GPR52Q9Y2T5 361 aa11.92□□□□□ -0.5
RPE-208ENST00000436630 RPL36Q9Y3U8 105 aaKnown RBP11.92□□□□□ -0.5
RPE-208ENST00000436630 SLC22A23A1A5C7 686 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 OR6C68A6NDL8 312 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 SLC1A7O00341 560 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 MRPL33O75394 65 aaKnown RBP11.91□□□□□ -0.5
RPE-208ENST00000436630 TNFAIP8O95379 198 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 HTR1FP30939 366 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 CDKN2AP42771 156 aaKnown RBP11.91□□□□□ -0.5
RPE-208ENST00000436630 ZNF133P52736 654 aaPredicted RBP11.91□□□□□ -0.5
RPE-208ENST00000436630 POU4F2Q12837 409 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 HIST3H3Q16695 136 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 KCTD21Q4G0X4 260 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 RPTNQ6XPR3 784 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 ZNF786Q8N393 782 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 POMGNT2Q8NAT1 580 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 CYB561A3Q8NBI2 242 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 CNIH3Q8TBE1 160 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 OTULINQ96BN8 352 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 TXNDC15Q96J42 360 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 ZNF582Q96NG8 517 aaPredicted RBP11.91□□□□□ -0.5
RPE-208ENST00000436630 LINC00470Q9BZP3 86 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 SYT4Q9H2B2 425 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 CCNB1IP1Q9NPC3 277 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 PLCXD1Q9NUJ7 323 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 UBAP1Q9NZ09 502 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 CNOT2Q9NZN8 540 aaKnown RBP11.91□□□□□ -0.5
RPE-208ENST00000436630 DNAJC27Q9NZQ0 273 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 MYRFQ9Y2G1 1151 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 TPRKBQ9Y3C4 175 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 FAM208BQ5VWN6 2430 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 ALPK2Q86TB3 2170 aa11.91□□□□□ -0.5
RPE-208ENST00000436630 EFCAB10A6NFE3 127 aa11.9□□□□□ -0.5
RPE-208ENST00000436630 FAM183AA6NL82 134 aa11.9□□□□□ -0.5
RPE-208ENST00000436630 ENTPD6O75354 484 aa11.9□□□□□ -0.5
RPE-208ENST00000436630 CNOT4O95628 575 aaKnown RBP11.9□□□□□ -0.5
RPE-208ENST00000436630 IL2RAP01589 272 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms