RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 HTRA1Q92743 480 aa16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 HDAC2Q92769 488 aaKnown RBP16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 NINJ1Q92982 152 aa16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 SLC25A44Q96H78 314 aaPredicted RBP16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 TSPAN32Q96QS1 320 aa16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 ZNF347Q96SE7 839 aa16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 NOX3Q9HBY0 568 aa16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 NGBQ9NPG2 151 aa16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 VNN3Q9NY84 501 aa16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 GLTPQ9NZD2 209 aa16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 PRRC2AP48634 2157 aaKnown RBP16.52■□□□□ 0.24
RPUSD3-207ENST00000433555 ABCD4O14678 606 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 TRMUO75648 421 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 B4GALT1P15291 398 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 SLC9A3P48764 834 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 DAP3P51398 398 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 PRPS1P60891 318 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 MYBPC1Q00872 1141 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 TESK1Q15569 626 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 LRFN4Q6PJG9 635 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 B3GLCTQ6Y288 498 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 OAFQ86UD1 273 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 ADGRG5Q8IZF4 528 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 CLDN22Q8N7P3 220 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 MAGEE2Q8TD90 523 aaPredicted RBP16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 ZNF566Q969W8 418 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 NMD3Q96D46 503 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 RSRC1Q96IZ7 334 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 BTBD10Q9BSF8 475 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 CADM1Q9BY67 442 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 MRPL13Q9BYD1 178 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 TXNIPQ9H3M7 391 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 MAGIXQ9H6Y5 334 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 B3GAT2Q9NPZ5 323 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 TMEM5Q9Y2B1 443 aa16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 HEATR1Q9H583 2144 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-207ENST00000433555 IGKV1D-43A0A0B4J1Z2 117 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 NPIPB13A6NJU9 1138 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 NPIPB4C9JG80 1138 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 HS3ST1O14792 307 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 IGHG1P01857 330 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 CELA3BP08861 270 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 CD40P25942 277 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 CTXN1P60606 82 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 FMODQ06828 376 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 HIST3H3Q16695 136 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 SSX8Q7RTT4 187 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 SYT14Q8NB59 555 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 OR4C15Q8NGM1 316 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 ZNF519Q8TB69 540 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 IGFBPL1Q8WX77 278 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 ZNF224Q9NZL3 707 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 SIGLEC7Q9Y286 467 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 ADAM18Q9Y3Q7 739 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 LYVE1Q9Y5Y7 322 aa16.5■□□□□ 0.23
RPUSD3-207ENST00000433555 IGHV1-18A0A0C4DH31 117 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 DNAJC8O75937 253 aaPredicted RBP16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 ACADSP16219 412 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 DNASE1P24855 282 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 CLRN1P58418 232 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 PPP1R8Q12972 351 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 KEAP1Q14145 624 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 ZNF672Q499Z4 452 aaPredicted RBP16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 ZBED5Q49AG3 693 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 THSD4Q6ZMP0 1018 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 ZNF813Q6ZN06 617 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 ZNF627Q7L945 461 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 ZER1Q7Z7L7 766 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 MCHR2Q969V1 340 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 ALPK1Q96QP1 1244 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 FOXB1Q99853 325 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 KATNB1Q9BVA0 655 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 OBP2BQ9NPH6 170 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 PLCE1Q9P212 2302 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 ZNF346Q9UL40 294 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 CREBBPQ92793 2442 aa16.49■□□□□ 0.23
RPUSD3-207ENST00000433555 PTP4A3O75365 173 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 SLC2A10O95528 541 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 WNT11O96014 354 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 QDPRP09417 244 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 PTAFRP25105 342 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 ERFP50548 548 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 ART1P52961 327 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 CDH11P55287 796 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 UBE2NP61088 152 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 RPL27P61353 136 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 ERVK-25P63136 954 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 TRAP1Q12931 704 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 KLHL17Q6TDP4 642 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 TMEM108Q6UXF1 575 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 C20orf204Q6ZNR8 217 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 RRM2BQ7LG56 351 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 FAM122BQ7Z309 247 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 MDP1Q86V88 176 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 CDK20Q8IZL9 346 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 OR9Q2Q8NGE9 314 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 LRGUKQ96M69 825 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 KCNK17Q96T54 332 aa16.48■□□□□ 0.23
RPUSD3-207ENST00000433555 TMEM38BQ9NVV0 291 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms