RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 HDDC2Q7Z4H3 204 aa17.98■□□□□ 0.47
HSPG2-205ENST00000427897 MDP1Q86V88 176 aa17.98■□□□□ 0.47
HSPG2-205ENST00000427897 CYP4Z1Q86W10 505 aa17.98■□□□□ 0.47
HSPG2-205ENST00000427897 CDK20Q8IZL9 346 aa17.98■□□□□ 0.47
HSPG2-205ENST00000427897 GEMIN6Q8WXD5 167 aaKnown RBP17.98■□□□□ 0.47
HSPG2-205ENST00000427897 INIPQ9NRY2 104 aa17.98■□□□□ 0.47
HSPG2-205ENST00000427897 RAB36O95755 333 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 SERPINA1P01009 418 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 IGKV3-15P01624 115 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 IGHG1P01857 330 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 HLA-HP01893 362 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 B4GALT1P15291 398 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 SERPINF1P36955 418 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 GSK3BP49841 420 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 DAP3P51398 398 aaKnown RBP17.97■□□□□ 0.47
HSPG2-205ENST00000427897 PSME3P61289 254 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 SNRPD2P62316 118 aaKnown RBP17.97■□□□□ 0.47
HSPG2-205ENST00000427897 C11orf71Q6IPW1 123 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 CLEC2AQ6UVW9 174 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 TRPM8Q7Z2W7 1104 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 SLC46A3Q7Z3Q1 461 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 PIWIL3Q7Z3Z3 882 aaKnown RBP17.97■□□□□ 0.47
HSPG2-205ENST00000427897 VTCN1Q7Z7D3 282 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 CA10Q9NS85 328 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 ARL8BQ9NVJ2 186 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 NDE1Q9NXR1 346 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 GMPR2Q9P2T1 348 aaKnown RBP17.97■□□□□ 0.47
HSPG2-205ENST00000427897 RHCGQ9UBD6 479 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 RPS6KA6Q9UK32 745 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 SPEF1Q9Y4P9 236 aa17.97■□□□□ 0.47
HSPG2-205ENST00000427897 UBL3O95164 117 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 FARS2O95363 451 aaKnown RBP17.96■□□□□ 0.47
HSPG2-205ENST00000427897 IGLV1-44P01699 117 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 SAGP10523 405 aaPredicted RBP17.96■□□□□ 0.47
HSPG2-205ENST00000427897 IFI30P13284 250 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 AQP2P41181 271 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 PTDSS1P48651 473 aaKnown RBP17.96■□□□□ 0.47
HSPG2-205ENST00000427897 ZNF84P51523 738 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 RPL18Q07020 188 aaKnown RBP17.96■□□□□ 0.47
HSPG2-205ENST00000427897 TRAM2Q15035 370 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 NHLRC1Q6VVB1 395 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 TMEM54Q969K7 222 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 NSL1Q96IY1 281 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 VRK1Q99986 396 aaPredicted RBP17.96■□□□□ 0.47
HSPG2-205ENST00000427897 REG4Q9BYZ8 158 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 RNF121Q9H920 327 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 SPAG4Q9NPE6 437 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 C20orf141Q9NUB4 165 aa17.96■□□□□ 0.47
HSPG2-205ENST00000427897 STX18Q9P2W9 335 aaKnown RBP17.96■□□□□ 0.47
HSPG2-205ENST00000427897 FAM32AQ9Y421 112 aaKnown RBP17.96■□□□□ 0.47
HSPG2-205ENST00000427897 HTR3EA5X5Y0 456 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 IGF2P01344 180 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 TP53P04637 393 aaPredicted RBP17.95■□□□□ 0.46
HSPG2-205ENST00000427897 CELA3BP08861 270 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 QDPRP09417 244 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 NCK1P16333 377 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 DSCR9P59020 149 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 RAB1AP62820 205 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 CBLL1Q75N03 491 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 HTRA1Q92743 480 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 BPIFA2Q96DR5 249 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 A4GNTQ9UNA3 340 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 CADP27708 2225 aa17.95■□□□□ 0.46
HSPG2-205ENST00000427897 B9A039 149 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 H7C417 338 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 DHHO43323 396 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 OR4A8P0C604 315 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 OR8G3PP0DMU2 310 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 CALB2P22676 271 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 CALCRP30988 508 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 MXRA7P84157 204 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 PPP2R2BQ00005 443 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 LAPTM4AQ15012 233 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 GLYATQ6IB77 296 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 WDFY1Q8IWB7 410 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 SYT14Q8NB59 555 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 HSH2DQ96JZ2 352 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 KCNN2Q9H2S1 579 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 DENND2DQ9H6A0 471 aaPredicted RBP17.94■□□□□ 0.46
HSPG2-205ENST00000427897 SEC61A2Q9H9S3 476 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 EGFL7Q9UHF1 273 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 FBXL3Q9UKT7 428 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 FKBP7Q9Y680 259 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 USF3Q68DE3 2245 aa17.94■□□□□ 0.46
HSPG2-205ENST00000427897 VPS13CQ709C8 3753 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 J3KTA2 159 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 PIP5K1CO60331 668 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 ERCC1P07992 297 aaPredicted RBP17.93■□□□□ 0.46
HSPG2-205ENST00000427897 PGA4P0DJD7 388 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 PGA3P0DJD8 388 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 ACADSP16219 412 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 NPR2P20594 1047 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 MYBPC1Q00872 1141 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 GALK2Q01415 458 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 DAG1Q14118 895 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 ALG10Q5BKT4 473 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 C8orf82Q6P1X6 216 aaPredicted RBP17.93■□□□□ 0.46
HSPG2-205ENST00000427897 C16orf89Q6UX73 402 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 ZNF730Q6ZMV8 503 aa17.93■□□□□ 0.46
HSPG2-205ENST00000427897 ZNF627Q7L945 461 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms