RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 PAGE3Q5JUK9 113 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 FHL5Q5TD97 284 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 SFXN4Q6P4A7 337 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 TAS1R1Q7RTX1 841 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 GPRIN1Q7Z2K8 1008 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 CLEC14AQ86T13 490 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 VASH2Q86V25 355 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 BCORP1Q8N888 145 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 C15orf54Q8N8G6 183 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 OR10G3Q8NGC4 313 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 OR5D16Q8NGK9 328 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 OR8J1Q8NGP2 316 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 TCTEX1D2Q8WW35 142 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ITPKCQ96DU7 683 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ABHD1Q96SE0 405 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ATP6V0BQ99437 205 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF251Q9BRH9 671 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 PAAF1Q9BRP4 392 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 GSTO2Q9H4Y5 243 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ACOT13Q9NPJ3 140 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF71Q9NQZ8 489 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 ACOXLQ9NUZ1 547 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ZNF446Q9NWS9 450 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 THAP10Q9P2Z0 257 aaPredicted RBP5.3□□□□□ -1.56
HERC4-206ENST00000427635 RIMS3Q9UJD0 308 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 ATG4BQ9Y4P1 393 aa5.3□□□□□ -1.56
HERC4-206ENST00000427635 NEURL4Q96JN8 1562 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 LRRC3CA6NJW4 275 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 DRGXA6NNA5 263 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 C9orf172C9J069 976 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 HCRTR1O43613 425 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 SLC19A1P41440 591 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 GPR12P47775 334 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 PRLHRP49683 370 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 TMPRSS3P57727 454 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 UBE2G1P62253 170 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 SRPXP78539 464 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 SNTB2Q13425 540 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 OR1Q1Q15612 314 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ALKBH6Q3KRA9 238 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 NKAIN1Q4KMZ8 207 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 TP53I3Q53FA7 332 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 CD300LGQ6UXG3 332 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 C17orf107Q6ZR85 190 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ENTHD1Q8IYW4 607 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ACBD4Q8NC06 268 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 OR2T6Q8NHC8 308 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ZNRF4Q8WWF5 429 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 INSM2Q96T92 566 aaPredicted RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 ALG8Q9BVK2 526 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 LTB4R2Q9NPC1 389 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 HEYLQ9NQ87 328 aaPredicted RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 OR5V1Q9UGF6 321 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 A3GALT2U3KPV4 340 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 IFT172Q9UG01 1749 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 WASH4PA8MWX3 477 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 SIAH2O43255 324 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 PTP4A3O75365 173 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 AADACP22760 399 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 GIFP27352 417 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 Q56UQ5 140 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 TOR2AQ5JU69 321 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 CDC20BQ86Y33 519 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 BATF2Q8N1L9 274 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ENDOVQ8N8Q3 282 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 DEFB108BQ8NET1 73 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 WBP2Q969T9 261 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 PATZ1Q9HBE1 687 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 PIGLQ9Y2B2 252 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 E7ESA3 106 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 HRO43593 1189 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 CD3EP07766 207 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 RPS17P08708 135 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 APOBEC1P41238 236 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 DEFA6Q01524 100 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 FLI1Q01543 452 aaPredicted RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 SLC5A12Q1EHB4 618 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 TMEM240Q5SV17 173 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 DESI1Q6ICB0 168 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 TSSK4Q6SA08 328 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 EPGNQ6UW88 154 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 BPIFB2Q8N4F0 458 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 OR56B1Q8NGI3 324 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 SYNPRQ8TBG9 265 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 GTF2H4Q92759 462 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ZNF419Q96HQ0 510 aaPredicted RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 TCEAL2Q9H3H9 227 aaPredicted RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 GLTPQ9NZD2 209 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 LRRC42Q9Y546 428 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ANTXRLA6NF34 631 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 CLDN24A6NM45 220 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ARHGAP33O14559 1287 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 GALR2O43603 387 aaPredicted RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 PRR35P0CG20 571 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 T-ENOLP0DO92 83 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 AREGP15514 252 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 ACAA2P42765 397 aaKnown RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 ZNF133P52736 654 aaPredicted RBP5.29□□□□□ -1.56
HERC4-206ENST00000427635 NCS1P62166 190 aa5.29□□□□□ -1.56
HERC4-206ENST00000427635 TLE1Q04724 770 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms