RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CDK5Q00535 292 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 YOD1Q5VVQ6 348 aaPredicted RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 UBTD2Q8WUN7 234 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 SLC25A43Q8WUT9 341 aaPredicted RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 SHARPINQ9H0F6 387 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF355PQ9NSJ1 428 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 OR6C68A6NDL8 312 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF239Q16600 458 aaKnown RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF626Q68DY1 528 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 OR2G3Q8NGZ4 309 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 DNAJA3Q96EY1 480 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 TREX1Q9NSU2 369 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 B4GAT1O43505 415 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 CCR7P32248 378 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 YPEL5P62699 121 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 KIAA0141Q14154 515 aaPredicted RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 EMC4Q5J8M3 183 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 OR10Z1Q8NGY1 313 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 POM121CA8CG34 1229 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 ST8SIA3O43173 380 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 ACOT6Q3I5F7 207 aaPredicted RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 MCATQ8IVS2 390 aaKnown RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 OR13F1Q8NGS4 319 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 FABP7O15540 132 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 PLRG1O43660 514 aaKnown RBP13.37□□□□□ -0.27
PTPN13-203ENST00000427191 MAKP20794 623 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 TFAP2EQ6VUC0 442 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 ESPNLQ6ZVH7 1005 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 CDC20BQ86Y33 519 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 OR2AE1Q8NHA4 323 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 TPPP3Q9BW30 176 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 IL17CQ9P0M4 197 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 MMACHCQ9Y4U1 282 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 FPR3P25089 353 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 HNRNPA1L2Q32P51 320 aaKnown RBP13.37□□□□□ -0.27
PTPN13-203ENST00000427191 ADPRMQ3LIE5 342 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 BEX5Q5H9J7 111 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 AGBL4Q5VU57 503 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 SSX7Q7RTT5 188 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 PPP1R3BQ86XI6 285 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 NPWQ8N729 165 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 FAM3DQ96BQ1 224 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 SLC35A4Q96G79 324 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 SLC29A1Q99808 456 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 ERVMER34-1Q9H9K5 563 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 ENSAO43768 121 aaKnown RBP13.37□□□□□ -0.27
PTPN13-203ENST00000427191 NME2P22392 152 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 ALKBH1Q13686 389 aaKnown RBP13.37□□□□□ -0.27
PTPN13-203ENST00000427191 KCTD11Q693B1 232 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 TMUB2Q71RG4 321 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 OVCH1Q7RTY7 1134 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 LAX1Q8IWV1 398 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 ABHD4Q8TB40 342 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 SFT2D1Q8WV19 159 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 CD1EP15812 388 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 SLC17A1Q14916 467 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 BPIFCQ8NFQ6 507 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 UTP23Q9BRU9 249 aaKnown RBP13.37□□□□□ -0.27
PTPN13-203ENST00000427191 TMEM38AQ9H6F2 299 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 GAREM1Q9H706 876 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 C21orf33P30042 268 aaPredicted RBP13.37□□□□□ -0.27
PTPN13-203ENST00000427191 GABREP78334 506 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 OR8B8Q15620 311 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 H3F3CQ6NXT2 135 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 C15orf39Q6ZRI6 1047 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 ASB11Q8WXH4 323 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 AOAHP28039 575 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 TEKQ02763 1124 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 NEURL3Q96EH8 262 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 TIMD4Q96H15 378 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 OR51I2Q9H344 312 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 OSGIN2Q9Y236 505 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 H0Y8G0 127 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 CYC1P08574 325 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 CLINT1Q14677 625 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 SYT6Q5T7P8 510 aaPredicted RBP13.37□□□□□ -0.27
PTPN13-203ENST00000427191 Q6ZSR6 202 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 TCEAL8Q8IYN2 117 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 SLC25A46Q96AG3 418 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 FBXL2Q9UKC9 423 aa13.37□□□□□ -0.27
PTPN13-203ENST00000427191 TRIP11Q15643 1979 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 M6PRP20645 277 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 SLC35A2P78381 396 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 USP53Q70EK8 1073 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 FAM185AQ8N0U4 392 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 GPR62Q9BZJ7 368 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 ACTR3CQ9C0K3 210 aaPredicted RBP13.36□□□□□ -0.27
PTPN13-203ENST00000427191 KIAA1456Q9P272 454 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 RP1L1Q8IWN7 2480 aaPredicted RBP13.36□□□□□ -0.27
PTPN13-203ENST00000427191 PIPP12273 146 aaPredicted RBP13.36□□□□□ -0.27
PTPN13-203ENST00000427191 HOXA11P31270 313 aaPredicted RBP13.36□□□□□ -0.27
PTPN13-203ENST00000427191 C18orf63Q68DL7 685 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 ACOT7LQ6ZUV0 252 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 SPRED1Q7Z699 444 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 GHSRQ92847 366 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 REEP6Q96HR9 211 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 OR2A14Q96R47 310 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 MED18Q9BUE0 208 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms