RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CFHR2P36980 270 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 ANP32AP39687 249 aaKnown RBP5.24□□□□□ -1.57
SDCBP-203ENST00000424270 MAP3K8P41279 467 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 EFNB2P52799 333 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 AQP5P55064 265 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 CDH13P55290 713 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 PLP2Q04941 152 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 FRG1Q14331 258 aaKnown RBP5.24□□□□□ -1.57
SDCBP-203ENST00000424270 ZKSCAN8Q15776 578 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-203ENST00000424270 LY6EQ16553 131 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF718Q3SXZ3 478 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 RUNDC3AQ59EK9 446 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 KHDC1LQ5JSQ8 128 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 FAM219BQ5XKK7 198 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 FAM71E1Q6IPT2 247 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 KCTD18Q6PI47 426 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-203ENST00000424270 C16orf62Q7Z3J2 963 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 LSRQ86X29 649 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-203ENST00000424270 RNF130Q86XS8 419 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 KDM8Q8N371 416 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 FITM2Q8N6M3 262 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 DTX3Q8N9I9 347 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 OR1J2Q8NGS2 313 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 OR5R1Q8NH85 324 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 SLC25A36Q96CQ1 311 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF837Q96EG3 531 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-203ENST00000424270 GIMAP5Q96F15 307 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 B3GNT2Q9NY97 397 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 TAS2R7Q9NYW3 318 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 MKLN1Q9UL63 735 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 ZDHHC8Q9ULC8 765 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 TMCO1Q9UM00 188 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 PPP1R3CQ9UQK1 317 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 TEX264Q9Y6I9 313 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 DNAH9Q9NYC9 4486 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 IQCMA0A1B0GVH7 501 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 ZC3H12DA2A288 527 aaKnown RBP5.23□□□□□ -1.57
SDCBP-203ENST00000424270 PRAMEF27A3QJZ7 478 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 ZSCAN5BA6NJL1 495 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF879B4DU55 563 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 SLC25A17O43808 307 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 TIMM8AO60220 97 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-203ENST00000424270 STX11O75558 287 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 CRCPO75575 148 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 PTHP01270 115 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 IGHV3-13P01766 116 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 SERPINA5P05154 406 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 WNT2P09544 360 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 PATE4P0C8F1 98 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 FAHP16930 419 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 EEF1B2P24534 225 aaKnown RBP5.23□□□□□ -1.57
SDCBP-203ENST00000424270 APLNRP35414 380 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 LIPAP38571 399 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 ANXA11P50995 505 aaKnown RBP5.23□□□□□ -1.57
SDCBP-203ENST00000424270 UCP2P55851 309 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 TEX35Q5T0J7 233 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 THEM4Q5T1C6 240 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 GRTP1Q5TC63 336 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 TMEM53Q6P2H8 277 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 UNQ6126/PRO20091Q6UXV3 157 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 EPHX4Q8IUS5 362 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 LRRC8AQ8IWT6 810 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 HIPK4Q8NE63 616 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 WFDC9Q8NEX5 89 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 OR2Z1Q8NG97 314 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 OR6N1Q8NGY5 312 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 C8orf46Q8TAG6 207 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 TFAP2CQ92754 450 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 HOXB13Q92826 284 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-203ENST00000424270 FAM120BQ96EK7 910 aaKnown RBP5.23□□□□□ -1.57
SDCBP-203ENST00000424270 MAGEB18Q96M61 343 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 OR5M11Q96RB7 305 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF382Q96SR6 550 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 ARHGDIGQ99819 225 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 CDADC1Q9BWV3 514 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 ULBP2Q9BZM5 246 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 NPFFR1Q9GZQ6 430 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 SEMA6AQ9H2E6 1030 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 MMADHCQ9H3L0 296 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-203ENST00000424270 MSL2Q9HCI7 577 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 EIF3KQ9UBQ5 218 aaKnown RBP5.23□□□□□ -1.57
SDCBP-203ENST00000424270 ATP6V1HQ9UI12 483 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 SLC35A3Q9Y2D2 325 aa5.23□□□□□ -1.57
SDCBP-203ENST00000424270 RYR1P21817 5038 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 DNAH1Q9P2D7 4330 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 A0A1W2PRD5 423 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 A0A1W2PRF3 423 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 A0A1W2PRM7 423 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 STX16-NPEPL1H3BU86 382 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 PPP6CO00743 305 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 STX16O14662 325 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 SURF4O15260 269 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 CFLARO15519 480 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 ENTPD5O75356 428 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 KLHL2O95198 593 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 FARS2O95363 451 aaKnown RBP5.22□□□□□ -1.57
SDCBP-203ENST00000424270 OPN1SWP03999 348 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 MAPK1P28482 360 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 SOAT1P35610 550 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 KIR2DS4P43632 304 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms