RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 HLA-BQ31612 363 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 FAM122BQ7Z309 247 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 ADGRG3Q86Y34 549 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 RBM12BQ8IXT5 1001 aaKnown RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 SLC7A6Q92536 515 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 DAZLQ92904 295 aaKnown RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 DVL3Q92997 716 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 PPP1R14BQ96C90 147 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 CGGBP1Q9UFW8 167 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 MRPS17Q9Y2R5 130 aaKnown RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 TCRBV16S1A1N1A0A5B0 115 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 TMEM221A6NGB7 291 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 ADRA2CP18825 462 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 CXCL3P19876 107 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 RPS18P62269 152 aaKnown RBP10.77□□□□□ -0.69
PTPRN-204ENST00000423636 ASAH1Q13510 395 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 FCN2Q15485 313 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 NKAIN1Q4KMZ8 207 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 COX15Q7KZN9 410 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.77□□□□□ -0.69
PTPRN-204ENST00000423636 OR14A16Q8NHC5 309 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 OR10A4Q9H209 315 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 RCE1Q9Y256 329 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 K7ESF4 209 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 RAMP1O60894 148 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 GLCEO94923 617 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 KDM4BO94953 1096 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 IFNGR1P15260 489 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 ANOS1P23352 680 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 SDHAP31040 664 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 HOXD12P35452 270 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 MTNR1BP49286 362 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 LGALS3BPQ08380 585 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 RPL13AP3Q6NVV1 102 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 TMEM205Q6UW68 189 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 GPALPP1Q8IXQ4 340 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 TOMM5Q8N4H5 51 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 OR51D1Q8NGF3 324 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 OR1N1Q8NGS0 311 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 MED18Q9BUE0 208 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 SEC61A2Q9H9S3 476 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 RBFOX1Q9NWB1 397 aaKnown RBP10.77□□□□□ -0.69
PTPRN-204ENST00000423636 ICAM5Q9UMF0 924 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 NPFFR2Q9Y5X5 522 aa10.77□□□□□ -0.69
PTPRN-204ENST00000423636 A0A0A6YYJ9 748 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 NUDT21O43809 227 aaKnown RBP10.76□□□□□ -0.69
PTPRN-204ENST00000423636 SSTR2P30874 369 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 MFGE8Q08431 387 aaPredicted RBP10.76□□□□□ -0.69
PTPRN-204ENST00000423636 CAMK2DQ13557 499 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 FNDC7Q5VTL7 733 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 NAXEQ8NCW5 288 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 OR52I2Q8NH67 350 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 OR5AK2Q8NH90 309 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 CRB3Q9BUF7 120 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 TCF7L1Q9HCS4 588 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 TAS2R10Q9NYW0 307 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 POLHQ9Y253 713 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 TECTAO75443 2155 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 SLC43A1O75387 559 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 ASAH2BP0C7U1 165 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 LIPCP11150 499 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 ARSBP15848 533 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 RBM34P42696 430 aaKnown RBP10.76□□□□□ -0.69
PTPRN-204ENST00000423636 INSM1Q01101 510 aaPredicted RBP10.76□□□□□ -0.69
PTPRN-204ENST00000423636 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.76□□□□□ -0.69
PTPRN-204ENST00000423636 TMEM44Q2T9K0 475 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 RTN4RL2Q86UN3 420 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 SPEM1Q8N4L4 309 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 FAM46BQ96A09 425 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 CCDC74BQ96LY2 380 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 UBL7Q96S82 380 aaPredicted RBP10.76□□□□□ -0.69
PTPRN-204ENST00000423636 KLHL13Q9P2N7 655 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 FBXL2Q9UKC9 423 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 IGKV3D-11A0A0A0MRZ8 115 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 TRIM3O75382 744 aaPredicted RBP10.76□□□□□ -0.69
PTPRN-204ENST00000423636 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 FAM220AQ7Z4H9 259 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 PRSS35Q8N3Z0 413 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 D2HGDHQ8N465 521 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 OR51A2Q8NGJ7 313 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 SYNPRQ8TBG9 265 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 RNF166Q96A37 237 aaPredicted RBP10.76□□□□□ -0.69
PTPRN-204ENST00000423636 DDOQ99489 341 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 SOX7Q9BT81 388 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 CYSLTR2Q9NS75 346 aa10.76□□□□□ -0.69
PTPRN-204ENST00000423636 GATBO75879 557 aaKnown RBP10.75□□□□□ -0.69
PTPRN-204ENST00000423636 UCHL1P09936 223 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 DCTDP32321 178 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 PRPS1P60891 318 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 SPOCK1Q08629 439 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 FOXF1Q12946 379 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 BTBD16Q32M84 506 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 C1orf140Q5VVS0 124 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 LYSMD4Q5XG99 296 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 B3GNTL1Q67FW5 361 aaPredicted RBP10.75□□□□□ -0.69
PTPRN-204ENST00000423636 RNF144BQ7Z419 303 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 APCDD1LQ8NCL9 501 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 HSPB11Q9Y547 144 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 COL4A2P08572 1712 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 FRG2CA6NGY1 282 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms