RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 KRCC1Q9NPI7 259 aaPredicted RBP4.03□□□□□ -1.76
CDC42EP3-202ENST00000422687 PFDN4Q9NQP4 134 aa4.03□□□□□ -1.76
CDC42EP3-202ENST00000422687 AHSPQ9NZD4 102 aa4.03□□□□□ -1.76
CDC42EP3-202ENST00000422687 FLRT3Q9NZU0 649 aa4.03□□□□□ -1.76
CDC42EP3-202ENST00000422687 MED11Q9P086 117 aa4.03□□□□□ -1.76
CDC42EP3-202ENST00000422687 CLEC4AQ9UMR7 237 aa4.03□□□□□ -1.76
CDC42EP3-202ENST00000422687 B3GALT5Q9Y2C3 310 aa4.03□□□□□ -1.76
CDC42EP3-202ENST00000422687 CMYA5Q8N3K9 4069 aa4.03□□□□□ -1.76
CDC42EP3-202ENST00000422687 MALRD1Q5VYJ5 2156 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 A0A087WZY1 265 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 A0A0J9YW62 118 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 TMEM272A0A1B0GTI8 110 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 TCRBV9S1A1TA0A576 114 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 FAM90A26D6RGX4 464 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 H7C417 338 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CLOCKO15516 846 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SPINT2O43291 252 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SCO2O43819 266 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SSX4O60224 188 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 LMX1BO60663 402 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 RAMP1O60894 148 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 NME6O75414 186 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 LCATP04180 440 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 NGFRP08138 427 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 GSTA2P09210 222 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 IFI6P09912 130 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 TCEA1P23193 301 aaKnown RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 IGFBP5P24593 272 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 IL12BP29460 328 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SSTR1P30872 391 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SPRP35270 261 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 MAP3K8P41279 467 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CTBP2P56545 445 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SSBP2P81877 361 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 BSPH1Q075Z2 132 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 C17orf67Q0P5P2 114 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 MAD2L1Q13257 205 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 HNF4GQ14541 408 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 ODF3L2Q3SX64 289 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 GRTP1Q5TC63 336 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CYB5R2Q6BCY4 276 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CLEC2AQ6UVW9 174 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 PET117Q6UWS5 81 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 APOOLQ6UXV4 268 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SSX8Q7RTT4 187 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 NUFIP2Q7Z417 695 aaKnown RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CCDC91Q7Z6B0 441 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CMC1Q7Z7K0 106 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CENPVQ7Z7K6 275 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CCDC190Q86UF4 302 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SAMD14Q8IZD0 417 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 ARIH2OSQ8N7S6 290 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SPC24Q8NBT2 197 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 NEXN-AS1Q8NBZ9 246 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 OR7G2Q8NG99 324 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 OR5M1Q8NGP8 315 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 OR2V1Q8NHB1 315 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 RNF128Q8TEB7 428 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 C10orf105Q8TEF2 133 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 KCTD4Q8WVF5 259 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CDKL2Q92772 493 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 EXT2Q93063 718 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 EFHD2Q96C19 240 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 NXNL1Q96CM4 212 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CITED2Q99967 270 aaPredicted RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 FAIM2Q9BWQ8 316 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 POTEKPQ9BYX7 375 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 PLA2G12AQ9BZM1 189 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SHCBP1LQ9BZQ2 653 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SHARPINQ9H0F6 387 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 PTGES2Q9H7Z7 377 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 ANKRA2Q9H9E1 313 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SDHAF3Q9NRP4 125 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 FAIMQ9NVQ4 179 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 CHCHD3Q9NX63 227 aaKnown RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 IL36RNQ9UBH0 155 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 MCTS1Q9ULC4 181 aaKnown RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 SNX12Q9UMY4 172 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 PPP2R2CQ9Y2T4 447 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 ANGPTL3Q9Y5C1 460 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF780BQ9Y6R6 833 aa4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 YLPM1P49750 1951 aaKnown RBP4.02□□□□□ -1.77
CDC42EP3-202ENST00000422687 NOTCH1P46531 2555 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 A0A1W2PRB8 838 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 E7EQL1 145 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 EIF3HO15372 352 aaKnown RBP eCLIP4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 CXCL13O43927 109 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 UTS2O95399 124 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 SYNGR4O95473 234 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 ANGPTL1O95841 491 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 NUDT3O95989 172 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 PLGP00747 810 aaPredicted RBP4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 C2P06681 752 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 CSF3P09919 207 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 PABPC4LP0CB38 370 aaKnown RBP4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 GFAPP14136 432 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 COX5AP20674 150 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 ACHEP22303 614 aa4.01□□□□□ -1.77
CDC42EP3-202ENST00000422687 USF1P22415 310 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms