RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 PMS2P3Q13401 168 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 MELKQ14680 651 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 NKPD1Q17RQ9 610 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 TSPYL5Q86VY4 417 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-203ENST00000420503 GTF2H4Q92759 462 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 IKZF5Q9H5V7 419 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 KCNK9Q9NPC2 374 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 DCAF16Q9NXF7 216 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 IFT52Q9Y366 437 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 A0A0B4J2E0 115 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 A0A1B0GX12 115 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 C17orf100A8MU93 164 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 TRIM77I1YAP6 450 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 CLIC1O00299 241 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 PLPP3O14495 311 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 HDAC3O15379 428 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 TMPRSS2O15393 492 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 OR2T1O43869 369 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 IL6P05231 212 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 MAKP20794 623 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 AHCYP23526 432 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 CSNK1A1P48729 337 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 SLC18A1P54219 525 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 CDH12P55289 794 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 TMEM33P57088 247 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 MAGOHP61326 146 aaKnown RBP10.96□□□□□ -0.65
LINC00339-203ENST00000420503 MYBPC1Q00872 1141 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 GALK2Q01415 458 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 PUDPQ08623 228 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 OR1Q1Q15612 314 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 TSTQ16762 297 aaKnown RBP10.96□□□□□ -0.65
LINC00339-203ENST00000420503 AGBL2Q5U5Z8 902 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 RGS7BPQ6MZT1 257 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-203ENST00000420503 LRFN4Q6PJG9 635 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 CCDC36Q8IYA8 594 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 C10orf53Q8N6V4 93 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 LSMEM1Q8N8F7 131 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 ICA1LQ8NDH6 482 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 ADPRHL1Q8NDY3 354 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 SGMS2Q8NHU3 365 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 BBS10Q8TAM1 723 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 MGARPQ8TDB4 240 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 TMEM54Q969K7 222 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 ITCHQ96J02 903 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 HINT3Q9NQE9 182 aaKnown RBP10.96□□□□□ -0.65
LINC00339-203ENST00000420503 SDR39U1Q9NRG7 319 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-203ENST00000420503 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 CORINQ9Y5Q5 1042 aa10.96□□□□□ -0.65
LINC00339-203ENST00000420503 SOX21Q9Y651 276 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-203ENST00000420503 WNK1Q9H4A3 2382 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 M0R3H8 397 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 AKAP8O43823 692 aaKnown RBP10.95□□□□□ -0.66
LINC00339-203ENST00000420503 SNNO75324 88 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-203ENST00000420503 FSHBP01225 129 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 IGHV2-5P01817 119 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 THY1P04216 161 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 SERPINA5P05154 406 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 ARAFP10398 606 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 BMP2P12643 396 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 PRKAR1BP31321 381 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 POLR2JP52435 117 aaKnown RBP10.95□□□□□ -0.66
LINC00339-203ENST00000420503 UBA52P62987 128 aaKnown RBP10.95□□□□□ -0.66
LINC00339-203ENST00000420503 ZP4Q12836 540 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 TTMPQ5BVD1 217 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 SPATA46Q5T0L3 261 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 ACSM5Q6NUN0 579 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 UGT2A3Q6UWM9 527 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 USP51Q70EK9 711 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 USP43Q70EL4 1123 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 SLC22A24Q8N4F4 322 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 LRRC17Q8N6Y2 441 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 GLB1L3Q8NCI6 653 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-203ENST00000420503 SLC30A7Q8NEW0 376 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 BHLHE22Q8NFJ8 381 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-203ENST00000420503 MAELQ96JY0 434 aaKnown RBP10.95□□□□□ -0.66
LINC00339-203ENST00000420503 LRR1Q96L50 414 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 C1orf147Q96MC9 270 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-203ENST00000420503 RBM4Q9BWF3 364 aaKnown RBP10.95□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF416Q9BWM5 594 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 ASPNQ9BXN1 380 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 C12orf10Q9HB07 376 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 TMEM38BQ9NVV0 291 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF446Q9NWS9 450 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 SLC7A8Q9UHI5 535 aa10.95□□□□□ -0.66
LINC00339-203ENST00000420503 IGLV3-9A0A075B6K5 115 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 TMEM120BA0PK00 339 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF726A6NNF4 738 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 C5orf58C9J3I9 102 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 UBL3O95164 117 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 LYPD3O95274 346 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 LCKP06239 509 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 IDO1P14902 403 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 MPV17P39210 176 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 RGS8P57771 180 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 RPS23P62266 143 aaKnown RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 LCN2P80188 198 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 MRPS11P82912 194 aaKnown RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 RBBP4Q09028 425 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms