RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SHC1P29353 583 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 CRABP1P29762 137 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 GSTT1P30711 240 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 RFC3P40938 356 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 NAA10P41227 235 aaPredicted RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 MAGEA5P43359 124 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 EIF1AXP47813 144 aaKnown RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 WNT4P56705 351 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 CLRN1P58418 232 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 B3GALT5-AS1P59052 145 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 TAS2R43P59537 309 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 PPIAP62937 165 aaKnown RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 HSF2Q03933 536 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 EMX1Q04741 257 aaPredicted RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 IRF3Q14653 427 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 PON3Q15166 354 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 POU4F3Q15319 338 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 MED22Q15528 200 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF239Q16600 458 aaKnown RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 HYAL4Q2M3T9 481 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 RNLSQ5VYX0 342 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 HBMQ6B0K9 141 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ABLIM2Q6H8Q1 611 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 IGFL2Q6UWQ7 119 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 TMPRSS11AQ6ZMR5 421 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 SHFQ7M4L6 423 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 PXKQ7Z7A4 578 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 GGNQ86UU5 652 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 MED12LQ86YW9 2145 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 UBQLNLQ8IYU4 475 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 GHDCQ8N2G8 530 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ZADH2Q8N4Q0 377 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 TMEM251Q8N6I4 163 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ACBD7Q8N6N7 88 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ZFP62Q8NB50 900 aaPredicted RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 NPEPL1Q8NDH3 523 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 OR13F1Q8NGS4 319 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 OR52N1Q8NH53 320 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 FNDC8Q8TC99 324 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ZPLD1Q8TCW7 415 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 HAS2Q92819 552 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 UFD1Q92890 307 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ISOC1Q96CN7 298 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ZMYND19Q96E35 227 aaPredicted RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ADAD1Q96M93 576 aaKnown RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 OXGR1Q96P68 337 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 MNTQ99583 582 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 SMAD5Q99717 465 aaKnown RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ALG8Q9BVK2 526 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ENKD1Q9H0I2 346 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 RBM38Q9H0Z9 239 aaKnown RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 SYT4Q9H2B2 425 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 RERGLQ9H628 205 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 LDAHQ9H6V9 325 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ADGRL4Q9HBW9 690 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 FANCFQ9NPI8 374 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 TRIM36Q9NQ86 728 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 MRPS18AQ9NVS2 196 aaKnown RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 PAQR5Q9NXK6 330 aaPredicted RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 HAO2Q9NYQ3 351 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 EMC3Q9P0I2 261 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 MCTS1Q9ULC4 181 aaKnown RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 MOKQ9UQ07 419 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 POLR1DQ9Y2S0 133 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 FKBP7Q9Y680 259 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ANKRD11Q6UB99 2663 aaPredicted RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 IGF2RP11717 2491 aa5.34□□□□□ -1.56
HMGB3-202ENST00000419110 WDFY3Q8IZQ1 3526 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 DAPL1A0PJW8 107 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 OR6C68A6NDL8 312 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF726A6NNF4 738 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF670-ZNF695F2Z2N8 137 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ZIC3O60481 467 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 TRMUO75648 421 aaKnown RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 INMTO95050 263 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 GABARAPO95166 117 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 WISP1O95388 367 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ACTL6AO96019 429 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 HLA-DQA2P01906 255 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 MT-ND5P03915 603 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 RFPL3SP0C7P2 107 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 C21orf33P30042 268 aaPredicted RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 PYCR1P32322 319 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ID4P47928 161 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 CSNK1A1P48729 337 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 GP2P55259 537 aaKnown RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 BIDP55957 195 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 GFRA1P56159 465 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 RAC3P60763 192 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 EFNB1P98172 346 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 PMP22Q01453 160 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 GLO1Q04760 184 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 C19orf57Q0VDD7 668 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 MLLT11Q13015 90 aaPredicted RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF169Q14929 603 aaPredicted RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 SYT6Q5T7P8 510 aaPredicted RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 GPR107Q5VW38 600 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 TMEM225Q6GV28 225 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ASB18Q6ZVZ8 466 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 TRILQ7L0X0 811 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms