RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 RNF13O43567 381 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 SASH3O75995 380 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 UBL3O95164 117 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 RAB36O95755 333 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 UMPSP11172 480 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 ZNF14P17017 642 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 ARFIP2P53365 341 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 RAB1AP62820 205 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 PIGFQ07326 219 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 MAPRE2Q15555 327 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 RABL3Q5HYI8 236 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 KRT80Q6KB66 452 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 ERICH5Q6P6B1 374 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 CALHM3Q86XJ0 350 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 SVOPLQ8N434 492 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 SPATA3Q8NHX4 192 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 SLC25A44Q96H78 314 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 PRSS27Q9BQR3 290 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 DYNLRB1Q9NP97 96 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 LPAR3Q9UBY5 353 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 BAG5Q9UL15 447 aa15.2■□□□□ 0.02
PDLIM2-208ENST00000416159 MALRD1Q5VYJ5 2156 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 SH3PXD2BA1X283 911 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 BBIP1A8MTZ0 92 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 KPNA4O00629 521 aaPredicted RBP15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 LMX1BO60663 402 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 STAMBPO95630 424 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 BCL10O95999 233 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 IFNA14P01570 189 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 ASAH2BP0C7U1 165 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 FAM157CP0CG43 387 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 ZNF35P13682 527 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 APEHP13798 732 aaKnown RBP15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 GIPRP48546 466 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 PTDSS1P48651 473 aaKnown RBP15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 EVX1P49640 407 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 CRYBA2P53672 197 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 KLF10Q13118 480 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 IQCCQ4KMZ1 466 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 TSPYL5Q86VY4 417 aaPredicted RBP15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 CARM1Q86X55 608 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 LRRC17Q8N6Y2 441 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 ZNF566Q969W8 418 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 MS4A3Q96HJ5 214 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 BEX2Q9BXY8 128 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 POLR2J2Q9GZM3 115 aaKnown RBP15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 POLR2J3Q9H1A7 115 aaKnown RBP15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 ZNF224Q9NZL3 707 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 SH3GLB1Q9Y371 365 aa15.19■□□□□ 0.02
PDLIM2-208ENST00000416159 FXYD1O00168 92 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 MRASO14807 208 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 OR8G3PP0DMU2 310 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 DAOP14920 347 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 ZNF16P17020 682 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 GLRXP35754 106 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 REP15Q6BDI9 236 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 LRFN4Q6PJG9 635 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 NANOGNBQ7Z5D8 188 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 SKA3Q8IX90 412 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 MRPL24Q96A35 216 aaKnown RBP15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 MEPEQ9NQ76 525 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 SAR1AQ9NR31 198 aa15.18■□□□□ 0.02
PDLIM2-208ENST00000416159 IGHV4-61A0A0C4DH41 118 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 BLOC1S5-TXNDC5H3BN57 136 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 DHHO43323 396 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 FARS2O95363 451 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 IGF2P01344 180 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 MT-ND1P03886 318 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 ADRA2AP08913 450 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 ZNF23P17027 643 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 FUT1P19526 365 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 GIFP27352 417 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 LSP1P33241 339 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 RBM34P42696 430 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 TAS2R41P59536 307 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 RPS23P62266 143 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 GALK2Q01415 458 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 MELKQ14680 651 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 RAB39AQ14964 217 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 GKAP1Q5VSY0 366 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 FAM166AQ6J272 317 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 DPPA2Q7Z7J5 298 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 CDK20Q8IZL9 346 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 ZCCHC24Q8N2G6 241 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 ZNF786Q8N393 782 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 SLC22A24Q8N4F4 322 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 PCYOX1LQ8NBM8 494 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 ZNF583Q96ND8 569 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 BPESC1Q9GZL8 116 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 SHARPINQ9H0F6 387 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 FGFR1OP2Q9NVK5 253 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 TMEM38BQ9NVV0 291 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 GID8Q9NWU2 228 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 KCNS2Q9ULS6 477 aa15.17■□□□□ 0.02
PDLIM2-208ENST00000416159 ATRQ13535 2644 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 DNHD1Q96M86 4753 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 LOC100653049A0A140TA62 436 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 LOC100289279A0A1B0GTE1 492 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 A0A1W2PRG6 482 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 CENPBD1B2RD01 187 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms