RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 FNDC11Q9BVV2 318 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 PRR14Q9BWN1 585 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 A4GNTQ9UNA3 340 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 TMED7Q9Y3B3 224 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ZNF337Q9Y3M9 751 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 TLN1Q9Y490 2541 aaKnown RBP13.04□□□□□ -0.32
SGCE-202ENST00000415788 A0A1B0GTH9 108 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 H3BML4 177 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 HLA-DQB1P01920 261 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ADRA2AP08913 450 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 PTBP1P26599 531 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■■□□ 14.7
SGCE-202ENST00000415788 HTR2BP41595 481 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 FOXK1P85037 733 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 RBPJQ06330 500 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 CRYZQ08257 329 aaKnown RBP13.04□□□□□ -0.32
SGCE-202ENST00000415788 PIN1Q13526 163 aaPredicted RBP13.04□□□□□ -0.32
SGCE-202ENST00000415788 TAB1Q15750 504 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 MZT2BQ6NZ67 158 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 KLHL17Q6TDP4 642 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 C5orf46Q6UWT4 87 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 GFRALQ6UXV0 394 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 RFPL4BQ6ZWI9 263 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 CREB3L2Q70SY1 520 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 CCDC28AQ8IWP9 274 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 PM20D2Q8IYS1 436 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 AQP11Q8NBQ7 271 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ST6GALNAC3Q8NDV1 305 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 NPAS1Q99742 590 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 SPRR3Q9UBC9 169 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 SLC7A7Q9UM01 511 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 SPTA1P02549 2419 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 A0A087WUJ7 227 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 ENTPD6O75354 484 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 OSMP13725 252 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 CPN1P15169 458 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 PTGS2P35354 604 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 OR3A3P47888 321 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 SLC9A3P48764 834 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 LHX2P50458 406 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 SMIM11AP58511 58 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 CD83Q01151 205 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 CEP78Q5JTW2 689 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 POMZP3Q6PJE2 187 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 METAP1DQ6UB28 335 aaPredicted RBP13.03□□□□□ -0.32
SGCE-202ENST00000415788 PLET1Q6UQ28 207 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 GDF7Q7Z4P5 450 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 ZNF843Q8N446 348 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 GTPBP3Q969Y2 492 aaKnown RBP13.03□□□□□ -0.32
SGCE-202ENST00000415788 MARVELD3Q96A59 401 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 DDIT4LQ96D03 193 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 DIRAS2Q96HU8 199 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 TIMP4Q99727 224 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 DHRS9Q9BPW9 319 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 ABCB9Q9NP78 766 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 ING3Q9NXR8 418 aa13.03□□□□□ -0.32
SGCE-202ENST00000415788 PIEZO2Q9H5I5 2752 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 M0R129 80 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 FFAR1O14842 300 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 MYL12BO14950 172 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 ICMTO60725 284 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 WISP2O76076 250 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 CDRT1O95170 752 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 TSPAN19P0C672 248 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 ZNF708P17019 499 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 HSF1Q00613 529 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 TRAM2Q15035 370 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 OCLNQ16625 522 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 SYT14P1Q58G82 188 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 ESPNLQ6ZVH7 1005 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 ELMOD2Q8IZ81 293 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 MEIOBQ8N635 442 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 DUSP18Q8NEJ0 188 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 STK35Q8TDR2 534 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 UBASH3BQ8TF42 649 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 HS6ST2Q96MM7 605 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 PRDM14Q9GZV8 571 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 MIXL1Q9H2W2 232 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 NMNAT1Q9HAN9 279 aaPredicted RBP13.02□□□□□ -0.32
SGCE-202ENST00000415788 MGAT4BQ9UQ53 548 aa13.02□□□□□ -0.32
SGCE-202ENST00000415788 ATMQ13315 3056 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 HEATR5AQ86XA9 2040 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 A0A1W2PQL4 384 aaPredicted RBP13.02□□□□□ -0.33
SGCE-202ENST00000415788 A0A1W2PRQ8 180 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 A8MVM7 634 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 NPIPA2E9PIF3 369 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 NPIPA3F8WFD2 350 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 J3KTA2 159 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 EFNA2O43921 213 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 WISP1O95388 367 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 GASTP01350 101 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 THY1P04216 161 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 CPEP16870 476 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.33
SGCE-202ENST00000415788 KIR2DL3P43628 341 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 MAP2K3P46734 347 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 PYDC2Q56P42 97 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 C12orf73Q69YU5 71 aa13.02□□□□□ -0.33
SGCE-202ENST00000415788 ZNF770Q6IQ21 691 aaPredicted RBP13.02□□□□□ -0.33
SGCE-202ENST00000415788 PHC2Q8IXK0 858 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms