RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 RCE1Q9Y256 329 aa13.28□□□□□ -0.28
CPNE1-208ENST00000414711 IGLV3-9A0A075B6K5 115 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 SLC22A23A1A5C7 686 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 H0YL77 283 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 SCN2BO60939 215 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 SEC22BO75396 215 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 VAMP5O95183 116 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 AK1P00568 194 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 CHRM4P08173 479 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 PRPH2P23942 346 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 CD80P33681 288 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 PTDSS1P48651 473 aaKnown RBP13.27□□□□□ -0.29
CPNE1-208ENST00000414711 MAP2K6P52564 334 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 SLC3A1Q07837 685 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 KIAA0040Q15053 153 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 SMU1Q2TAY7 513 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 BRD3OSQ6XYD6 125 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 Q6YL49 198 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 BHLHE22Q8NFJ8 381 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-208ENST00000414711 OR10S1Q8NGN2 331 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 THOC1Q96FV9 657 aaKnown RBP13.27□□□□□ -0.29
CPNE1-208ENST00000414711 PPP1R36Q96LQ0 422 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 DIRC2Q96SL1 478 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 ZNF350Q9GZX5 532 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 FAM107BQ9H098 131 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 EXOSC3Q9NQT5 275 aaKnown RBP13.27□□□□□ -0.29
CPNE1-208ENST00000414711 C1orf109Q9NX04 203 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 CCL27Q9Y4X3 112 aa13.27□□□□□ -0.29
CPNE1-208ENST00000414711 A0A0G2JND7 137 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 SDHDO14521 159 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 AP3D1O14617 1153 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 LSM1O15116 133 aaKnown RBP13.26□□□□□ -0.29
CPNE1-208ENST00000414711 SLC43A1O75387 559 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 RAB36O95755 333 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 SDC1P18827 310 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 SLC6A9P48067 706 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 IDH3AP50213 366 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 CLDN17P56750 224 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 RPS26P62854 115 aaKnown RBP13.26□□□□□ -0.29
CPNE1-208ENST00000414711 PLAURQ03405 335 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 COL10A1Q03692 680 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 MAD2L1Q13257 205 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-208ENST00000414711 OXLD1Q5BKU9 147 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 CGB2Q6NT52 195 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 MAVSQ7Z434 540 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 OR2T11Q8NH01 316 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 SYNPRQ8TBG9 265 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 DYRK2Q92630 601 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 MAELQ96JY0 434 aaKnown RBP13.26□□□□□ -0.29
CPNE1-208ENST00000414711 C3orf30Q96M34 536 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 ELAC2Q9BQ52 826 aaKnown RBP13.26□□□□□ -0.29
CPNE1-208ENST00000414711 CCDC28BQ9BUN5 200 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 RASD1Q9Y272 281 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 TMED5Q9Y3A6 229 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 POMT1Q9Y6A1 747 aa13.26□□□□□ -0.29
CPNE1-208ENST00000414711 RYR2Q92736 4967 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 PEX11AO75192 247 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 UBOX5O94941 541 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 FAM107AO95990 144 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 MT-ND5P03915 603 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 MELTFP08582 738 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 FAM157BP0CG42 384 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 ZNF250P15622 560 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 LBPP18428 481 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 MAPK1P28482 360 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 EPHA3P29320 983 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 GIPRP48546 466 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 GLO1Q04760 184 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 GALNTL6Q49A17 601 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 C6orf136Q5SQH8 315 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 NXNQ6DKJ4 435 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 SPICQ8N5J4 248 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 SFXN5Q8TD22 340 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 TAPBPLQ9BX59 468 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 TMEM120AQ9BXJ8 343 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 WDR55Q9H6Y2 383 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-208ENST00000414711 AKTIPQ9H8T0 292 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 TCF7L2Q9NQB0 619 aa13.25□□□□□ -0.29
CPNE1-208ENST00000414711 DNAH3Q8TD57 4116 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 DHHO43323 396 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 GPR137BO60478 399 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 IGHV2-70P01814 119 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 RPL38P63173 70 aaKnown RBP13.24□□□□□ -0.29
CPNE1-208ENST00000414711 EMX2Q04743 252 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 ARHGAP11BQ3KRB8 267 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 FAM209AQ5JX71 171 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 OGFOD2Q6N063 350 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 BTNL3Q6UXE8 466 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 C16orf62Q7Z3J2 963 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 KLHL36Q8N4N3 616 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 FNDC5Q8NAU1 212 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 OR5AK3PQ8NH89 298 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 PSMA8Q8TAA3 256 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 OIT3Q8WWZ8 545 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 MTERF3Q96E29 417 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 PATZ1Q9HBE1 687 aaKnown RBP13.24□□□□□ -0.29
CPNE1-208ENST00000414711 IL20RAQ9UHF4 553 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 BAIAP2L1Q9UHR4 511 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 TRIM33Q9UPN9 1127 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms