RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 STX4Q12846 297 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 TRAF3Q13114 568 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 GPR17Q13304 367 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 INPP5JQ15735 1006 aaPredicted RBP5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 DUSP6Q16828 381 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 ZNF284Q2VY69 593 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 TRMT5Q32P41 509 aaKnown RBP5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 RFX4Q33E94 735 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 GCSAMLQ5JQS6 135 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 WASHC2DQ5SRD0 308 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 TIMM23BQ5SRD1 257 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 LPCAT4Q643R3 524 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 EMBQ6PCB8 327 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 ATRAIDQ6UW56 229 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 MPZL3Q6UWV2 235 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 ZNF730Q6ZMV8 503 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 CCDC121Q6ZUS5 278 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 LIMS2Q7Z4I7 341 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 ZNF554Q86TJ5 538 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 SLC51BQ86UW2 128 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 C15orf54Q8N8G6 183 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 SLC16A11Q8NCK7 471 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 FAM222BQ8WU58 562 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 OMA1Q96E52 524 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 WDR34Q96EX3 536 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 IL12RB2Q99665 862 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 EBNA1BP2Q99848 306 aaKnown RBP5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 CHRNA10Q9GZZ6 450 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 METTL9Q9H1A3 318 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 MEGF9Q9H1U4 602 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 EXD2Q9NVH0 621 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 FGFR1OP2Q9NVK5 253 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 LSM7Q9UK45 103 aaKnown RBP5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 UBQLN1Q9UMX0 589 aaKnown RBP5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 RCL1Q9Y2P8 373 aaKnown RBP5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 MMACHCQ9Y4U1 282 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 STYXL1Q9Y6J8 313 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 CSNK1G3Q9Y6M4 447 aa5.08□□□□□ -1.6
CBX1P3-201ENST00000413296 CPSF1Q10570 1443 aaKnown RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 KTN1Q86UP2 1357 aaKnown RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 NUP188Q5SRE5 1749 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 A0A0G2JNG1 304 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 SLC5A10A0PJK1 596 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 TVP23AA6NH52 213 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 HIDE1A8MVS5 230 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 H3BNH8 94 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 M0QZ92 97 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 PLPP3O14495 311 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 ACOX3O15254 700 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 TM9SF1O15321 606 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 MAGEB4O15481 346 aaPredicted RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 ORM1P02763 201 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 FGF2P09038 288 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 CBR1P16152 277 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 COMTP21964 271 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 GNLYP22749 145 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 HOXD3P31249 432 aaPredicted RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 RPL4P36578 427 aaKnown RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 GMPRP36959 345 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 TGFBR2P37173 567 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 DNA2P51530 1060 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 FUT6P51993 359 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 RPL27P61353 136 aaKnown RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 LSM6P62312 80 aaKnown RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 DHODHQ02127 395 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 RIPPLY1Q0D2K3 151 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 CRHR2Q13324 411 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 ITPK1Q13572 414 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 KIR2DS5Q14953 304 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 SF3A2Q15428 464 aaKnown RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 NDUFA9Q16795 377 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 DUSP7Q16829 419 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 PRTGQ2VWP7 1150 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 TMEM52BQ4KMG9 183 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 PIK3CD-AS1Q5SR53 167 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 FAHD2BQ6P2I3 314 aaPredicted RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 TSEN54Q7Z6J9 526 aaKnown RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 OR2L13Q8N349 312 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 KIR3DL3Q8N743 410 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 ATP6V0D2Q8N8Y2 350 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 LFNGQ8NES3 379 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 OR4K2Q8NGD2 314 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 OR1J1Q8NGS3 322 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 FBXO25Q8TCJ0 367 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 DYNC2LI1Q8TCX1 351 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 SETD7Q8WTS6 366 aaKnown RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 FAM172AQ8WUF8 416 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 DYDC1Q8WWB3 177 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 IFT81Q8WYA0 676 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 PTH2Q96A98 100 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 SGTBQ96EQ0 304 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 FAHD2AQ96GK7 314 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 PRAP1Q96NZ9 151 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 SERPINB12Q96P63 405 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 RNF2Q99496 336 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 EPYCQ99645 322 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 TRIM51Q9BSJ1 452 aa5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 MRPS26Q9BYN8 205 aaKnown RBP5.07□□□□□ -1.6
CBX1P3-201ENST00000413296 SLC22A4Q9H015 551 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms