RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ACSM4P0C7M7 580 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 PNMA6AP0CW24 399 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-204ENST00000412061 BGNP21810 368 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 IVDP26440 423 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 SPRP35270 261 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-204ENST00000412061 TFPI2P48307 235 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 GPM6AP51674 278 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 BIDP55957 195 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 UBE2G2P60604 165 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 TNXAQ16473 311 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 CNPY1Q3B7I2 92 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 TPRG1LQ5T0D9 272 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 GPRC6AQ5T6X5 926 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 ADNP2Q6IQ32 1131 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-204ENST00000412061 PWWP2BQ6NUJ5 590 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 USP43Q70EL4 1123 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 KLHDC8BQ8IXV7 354 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 PRELID2Q8N945 189 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 NOXO1Q8NFA2 376 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 NUP37Q8NFH4 326 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 OR5K2Q8NHB8 316 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 C11orf45Q8TAV5 145 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 CXorf40AQ8TE69 158 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 GMPPAQ96IJ6 420 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-204ENST00000412061 OR5B12Q96R08 314 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 MCHR1Q99705 422 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 CTRCQ99895 268 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 SH3GL1Q99961 368 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 UQCC2Q9BRT2 126 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 CNPY3Q9BT09 278 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 HCAR1Q9BXC0 346 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 ANGPTL4Q9BY76 406 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 ULBP2Q9BZM5 246 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 NSRP1Q9H0G5 558 aaKnown RBP3.64□□□□□ -1.83
BRCA1-204ENST00000412061 PATZ1Q9HBE1 687 aaKnown RBP3.64□□□□□ -1.83
BRCA1-204ENST00000412061 EML4Q9HC35 981 aaKnown RBP3.64□□□□□ -1.83
BRCA1-204ENST00000412061 VCX3AQ9NNX9 186 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 RSPH14Q9UHP6 348 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 PSMD13Q9UNM6 376 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 AUP1Q9Y679 476 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 V9GYY9 64 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 IGLV3-22A0A075B6J6 115 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 IGHV3OR16-12A0A075B7B8 117 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 A0A1B0GW55 424 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 A0A1B0GWB2 263 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 B4DXG7 233 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 RNASEK-C17orf49H0YIS7 233 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 CDC7O00311 574 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 PDHXO00330 501 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 CLDN11O75508 207 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 GPX5O75715 221 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 BRI3O95415 125 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 FGF1P05230 155 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DUX4L2P0CJ85 424 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DUX4L3P0CJ86 424 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DUX4L4P0CJ87 422 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DUX4L5P0CJ88 424 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DUX4L6P0CJ89 424 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DUX4L7P0CJ90 424 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 RBMY1CP0DJD4 496 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 TCN1P20061 433 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 IGFBP5P24593 272 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 OR1E1P30953 314 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 RFC3P40938 356 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 HAAOP46952 286 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 OR1D4P47884 311 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 CSNK1A1P48729 337 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 EFNA3P52797 238 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 ATP12AP54707 1039 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 NDUFV3P56181 108 aaKnown RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 SRPXP78539 464 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 ADARB1P78563 741 aaKnown RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 CYCSP99999 105 aaKnown RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 FKBP3Q00688 224 aaKnown RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 TLE4Q04727 773 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 SLAMF1Q13291 335 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF146Q15072 292 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF691Q5VV52 312 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 TRIM40Q6P9F5 258 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DUX4L9Q6RFH8 374 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 LINC00336Q6ZUF6 198 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 PLA2G4DQ86XP0 818 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 PRR22Q8IZ63 422 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 MCOLN2Q8IZK6 566 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 SPAG16Q8N0X2 631 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 PDIK1LQ8N165 341 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 KIF2BQ8N4N8 673 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 OR6N2Q8NGY6 317 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF519Q8TB69 540 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 LGALS14Q8TCE9 139 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 SSC4DQ8WTU2 575 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 TMEM239Q8WW34 195 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 NDRG1Q92597 394 aaKnown RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 DUS3LQ96G46 650 aaKnown RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 PAGE5Q96GU1 130 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 POM121L2Q96KW2 1035 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 UTP23Q9BRU9 249 aaKnown RBP3.63□□□□□ -1.83
BRCA1-204ENST00000412061 OSBPL10Q9BXB5 764 aa3.63□□□□□ -1.83
BRCA1-204ENST00000412061 ACTR6Q9GZN1 396 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms