RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 KIR2DL3P43628 341 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 ARL16Q0P5N6 197 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 SLC35D3Q5M8T2 416 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 FAM71E1Q6IPT2 247 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 ZFP82Q8N141 532 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 ASB16Q96NS5 453 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 TMEM38AQ9H6F2 299 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 C6orf106Q9H6K1 298 aaPredicted RBP16.92■□□□□ 0.3
HCG11-201ENST00000411553 PIGLQ9Y2B2 252 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 PCDHGA5Q9Y5G8 931 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 IGHV3-20A0A0C4DH32 117 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 C4orf47A7E2U8 309 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 NAGAP17050 411 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 NKAIN1Q4KMZ8 207 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 GDPD3Q7L5L3 318 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 PHF7Q9BWX1 381 aaPredicted RBP16.92■□□□□ 0.3
HCG11-201ENST00000411553 CRYBG1Q9Y4K1 1723 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 GRPP07492 148 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 IRS1P35568 1242 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 HNF4GQ14541 408 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 ZNF77Q15935 545 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 RBMS3Q6XE24 437 aaKnown RBP16.92■□□□□ 0.3
HCG11-201ENST00000411553 DCXRQ7Z4W1 244 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 SPRED1Q7Z699 444 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 NKAIN3Q8N8D7 197 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 NRSN2Q9GZP1 204 aa16.92■□□□□ 0.3
HCG11-201ENST00000411553 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.92■□□□□ 0.3
HCG11-201ENST00000411553 CCSMST1Q4G0I0 132 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 PSMB1P20618 241 aaKnown RBP16.91■□□□□ 0.3
HCG11-201ENST00000411553 GSK3AP49840 483 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 SPRED3Q2MJR0 410 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 PLPP6Q8IY26 295 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 ZNF511Q8NB15 262 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 WFDC5Q8TCV5 224 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 INTS12Q96CB8 462 aaKnown RBP16.91■□□□□ 0.3
HCG11-201ENST00000411553 C20orf27Q9GZN8 174 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 CXCL16Q9H2A7 254 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 MMP17Q9ULZ9 603 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 ETV7Q9Y603 341 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 FKBP2P26885 142 aaKnown RBP16.91■□□□□ 0.3
HCG11-201ENST00000411553 SERPINF1P36955 418 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 APOBEC1P41238 236 aaKnown RBP16.91■□□□□ 0.3
HCG11-201ENST00000411553 SLC16A11Q8NCK7 471 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 NANPQ8TBE9 248 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 RASD2Q96D21 266 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 METTL17Q9H7H0 456 aaPredicted RBP16.91■□□□□ 0.3
HCG11-201ENST00000411553 FGF22Q9HCT0 170 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 FAM212BQ9NTI7 297 aaPredicted RBP16.91■□□□□ 0.3
HCG11-201ENST00000411553 DEFA4P12838 97 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 P2RX1P51575 399 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 TLE4Q04727 773 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 EDDM3AQ14507 147 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 NAXDQ8IW45 347 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 MAML2Q8IZL2 1156 aaPredicted RBP16.91■□□□□ 0.3
HCG11-201ENST00000411553 TIMD4Q96H15 378 aa16.91■□□□□ 0.3
HCG11-201ENST00000411553 MAP2K6P52564 334 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 ZNF133P52736 654 aaPredicted RBP16.9■□□□□ 0.3
HCG11-201ENST00000411553 TDHQ8IZJ6 230 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 RHOXF1Q8NHV9 184 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 EMG1Q92979 244 aaKnown RBP16.9■□□□□ 0.3
HCG11-201ENST00000411553 TARM1B6A8C7 271 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 GLCEO94923 617 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 AKR7A3O95154 331 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 TGM6O95932 706 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 NFYBP25208 207 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 SHHQ15465 462 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 LANCL2Q9NS86 450 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 BSCL2Q96G97 398 aaPredicted RBP16.9■□□□□ 0.3
HCG11-201ENST00000411553 RAB22AQ9UL26 194 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 SSUH2Q9Y2M2 353 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 A0A0B4J2A0 478 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 PHF1O43189 567 aaPredicted RBP16.9■□□□□ 0.3
HCG11-201ENST00000411553 FADS1O60427 444 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 RPS23P62266 143 aaKnown RBP16.9■□□□□ 0.3
HCG11-201ENST00000411553 AFMIDQ63HM1 303 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 NAA40Q86UY6 237 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 SLC35A4Q96G79 324 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 DCLRE1CQ96SD1 692 aaKnown RBP16.9■□□□□ 0.3
HCG11-201ENST00000411553 PSD2Q9BQI7 771 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 SHPKQ9UHJ6 478 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 AGAP14A8MT82 685 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 PAPLNO95428 1278 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 HBE1P02100 147 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 EPHA5P54756 1037 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 RELAQ04206 551 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 NECAP2Q9NVZ3 263 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 NPFFR2Q9Y5X5 522 aa16.9■□□□□ 0.3
HCG11-201ENST00000411553 CLEC3BP05452 202 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 SELEP16581 610 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 ANXA7P20073 488 aaKnown RBP16.89■□□□□ 0.29
HCG11-201ENST00000411553 C9orf152Q5JTZ5 239 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 ADGRE4PQ86SQ3 457 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 FAM71CQ8NEG0 241 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 OR5M1Q8NGP8 315 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 C11orf40Q8WZ69 217 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 UTP4Q969X6 686 aaKnown RBP16.89■□□□□ 0.29
HCG11-201ENST00000411553 KIRREL1Q96J84 757 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 FCRL1Q96LA6 429 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 AMBRA1Q9C0C7 1298 aa16.89■□□□□ 0.29
HCG11-201ENST00000411553 SLC39A9Q9NUM3 307 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms