RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 HIST1H2ABP04908 130 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 IFNGR1P15260 489 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 THBS2P35442 1172 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 CHN2P52757 468 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 RAB1AP62820 205 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 PIGFQ07326 219 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 ZP4Q12836 540 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 GKAP1Q5VSY0 366 aaPredicted RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 SLC35D2Q76EJ3 337 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 HIST3H2AQ7L7L0 130 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 OR10A6Q8NH74 314 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 HIST1H2ACQ93077 130 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 ZNF566Q969W8 418 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 MRPL24Q96A35 216 aaKnown RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 MSI2Q96DH6 328 aaKnown RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 GLTPQ9NZD2 209 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 SLC7A7Q9UM01 511 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 RTTNQ86VV8 2226 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 PHF1O43189 567 aaPredicted RBP12.73□□□□□ -0.37
CBX3-203ENST00000409747 RNF13O43567 381 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 CH25HO95992 272 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 SRD5A1P18405 259 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 GLRXP35754 106 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 CYLC2Q14093 348 aaPredicted RBP12.73□□□□□ -0.37
CBX3-203ENST00000409747 WDR88Q6ZMY6 472 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 CDK20Q8IZL9 346 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 ZNF786Q8N393 782 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 TMEM54Q969K7 222 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 TAMM41Q96BW9 452 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 SLC25A44Q96H78 314 aaPredicted RBP12.73□□□□□ -0.37
CBX3-203ENST00000409747 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 ZNF426Q9BUY5 554 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 CHODLQ9H9P2 273 aa12.73□□□□□ -0.37
CBX3-203ENST00000409747 TMEM129A0AVI4 362 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 SH3PXD2BA1X283 911 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 M0R233 179 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 SYNGR3O43761 229 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 FARS2O95363 451 aaKnown RBP12.72□□□□□ -0.37
CBX3-203ENST00000409747 ADRA2AP08913 450 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 UMPSP11172 480 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 ZNF35P13682 527 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 IGFBP5P24593 272 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 GIPRP48546 466 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 VMACQ2NL98 169 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 REP15Q6BDI9 236 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 UGT2A3Q6UWM9 527 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 HDDC2Q7Z4H3 204 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 NANOGNBQ7Z5D8 188 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 DPPA2Q7Z7J5 298 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 UBASH3BQ8TF42 649 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 HPS1Q92902 700 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 ZNF75AQ96N20 296 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 POLR2J2Q9GZM3 115 aaKnown RBP12.72□□□□□ -0.37
CBX3-203ENST00000409747 POLR2J3Q9H1A7 115 aaKnown RBP12.72□□□□□ -0.37
CBX3-203ENST00000409747 MS4A5Q9H3V2 200 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 TAS2R5Q9NYW4 299 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 SLC7A8Q9UHI5 535 aa12.72□□□□□ -0.37
CBX3-203ENST00000409747 KPNA4O00629 521 aaPredicted RBP12.71□□□□□ -0.37
CBX3-203ENST00000409747 TACSTD2P09758 323 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 OR8G3PP0DMU2 310 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 FAM120AOSQ5T036 256 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 RBM45Q8IUH3 476 aaKnown RBP12.71□□□□□ -0.37
CBX3-203ENST00000409747 WDFY1Q8IWB7 410 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 PHC2Q8IXK0 858 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 SLC22A24Q8N4F4 322 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 OR4D11Q8NGI4 311 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 MRPL37Q9BZE1 423 aaKnown RBP12.71□□□□□ -0.37
CBX3-203ENST00000409747 ZNF224Q9NZL3 707 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 BAG5Q9UL15 447 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 STAB1Q9NY15 2570 aa12.71□□□□□ -0.37
CBX3-203ENST00000409747 SVEP1Q4LDE5 3571 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 LYPD3O95274 346 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 TGFAP01135 160 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 NPPAP01160 153 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 IGHG1P01857 330 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 THY1P04216 161 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 SERPINA5P05154 406 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 ASAH2BP0C7U1 165 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 RBM34P42696 430 aaKnown RBP12.71□□□□□ -0.38
CBX3-203ENST00000409747 NRN1LQ496H8 165 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 COQ5Q5HYK3 327 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 NANOGP8Q6NSW7 305 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 ZCCHC24Q8N2G6 241 aaKnown RBP12.71□□□□□ -0.38
CBX3-203ENST00000409747 OR8J3Q8NGG0 315 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 ECSITQ9BQ95 431 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 C1orf198Q9H425 327 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 NANOGQ9H9S0 305 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 TMEM38BQ9NVV0 291 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 REV1Q9UBZ9 1251 aa12.71□□□□□ -0.38
CBX3-203ENST00000409747 A0A1W2PRG6 482 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 SLC22A23A1A5C7 686 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 BBIP1A8MTZ0 92 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 CENPBD1B2RD01 187 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 BCL10O95999 233 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 IFNA14P01570 189 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 PGA4P0DJD7 388 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 PGA3P0DJD8 388 aa12.7□□□□□ -0.38
CBX3-203ENST00000409747 TROVE2P10155 538 aaKnown RBP eCLIP12.7□□□□□ -0.38
CBX3-203ENST00000409747 GZMMP51124 257 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms