RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ASB6Q9NWX5 421 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 CLEC2DQ9UHP7 191 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 RASD1Q9Y272 281 aa18.81■□□□□ 0.6
TPM1-208ENST00000404484 LSM2Q9Y333 95 aaKnown RBP18.81■□□□□ 0.6
TPM1-208ENST00000404484 PRSS37A4D1T9 235 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 AQP7P3A6NL99 342 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 CENPAP49450 140 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 ETV1P50549 477 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 WNT4P56705 351 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 POU3F1Q03052 451 aaPredicted RBP18.8■□□□□ 0.6
TPM1-208ENST00000404484 CNPY1Q3B7I2 92 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 ESPNLQ6ZVH7 1005 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 SLC35D2Q76EJ3 337 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 SHFQ7M4L6 423 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 ANKRD13BQ86YJ7 626 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 TMEM99Q8N816 258 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 OXGR1Q96P68 337 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 MYCBPQ99417 103 aaPredicted RBP18.8■□□□□ 0.6
TPM1-208ENST00000404484 MGLLQ99685 303 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 DOK1Q99704 481 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 FUNDC2Q9BWH2 189 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 ADGRL4Q9HBW9 690 aa18.8■□□□□ 0.6
TPM1-208ENST00000404484 VSX1Q9NZR4 365 aaPredicted RBP18.8■□□□□ 0.6
TPM1-208ENST00000404484 SPENQ96T58 3664 aaKnown RBP18.79■□□□□ 0.6
TPM1-208ENST00000404484 ACOT7O00154 380 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 AHCYL1O43865 530 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 GLSO94925 669 aaPredicted RBP18.79■□□□□ 0.6
TPM1-208ENST00000404484 VAMP5O95183 116 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 POU3F2P20265 443 aaPredicted RBP18.79■□□□□ 0.6
TPM1-208ENST00000404484 TNFSF10P50591 281 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 ARMCX4Q5H9R4 360 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 WIPI1Q5MNZ9 446 aaPredicted RBP18.79■□□□□ 0.6
TPM1-208ENST00000404484 TMEM225Q6GV28 225 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 SLC22A16Q86VW1 577 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 KLHL36Q8N4N3 616 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 TEX19Q8NA77 164 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 OR6K6Q8NGW6 343 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 OR52N1Q8NH53 320 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 ZPLD1Q8TCW7 415 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 ASB10Q8WXI3 467 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 ZMYND19Q96E35 227 aaPredicted RBP18.79■□□□□ 0.6
TPM1-208ENST00000404484 YIPF6Q96EC8 236 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 FKBP7Q9Y680 259 aa18.79■□□□□ 0.6
TPM1-208ENST00000404484 HELZ2Q9BYK8 2649 aaKnown RBP18.78■□□□□ 0.6
TPM1-208ENST00000404484 C12orf71A8MTZ7 269 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 LIMS3P0CW19 117 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 LIMS4P0CW20 117 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 HSMCR30P0CW71 290 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 IFNGR1P15260 489 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 P2RY4P51582 365 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 BLVRAP53004 296 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 KLRB1Q12918 225 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 PDSS1Q5T2R2 415 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 TMPRSS11AQ6ZMR5 421 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 P2RY8Q86VZ1 359 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 ALDH16A1Q8IZ83 802 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 GHDCQ8N2G8 530 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 ZFP62Q8NB50 900 aaPredicted RBP18.78■□□□□ 0.6
TPM1-208ENST00000404484 OR10H4Q8NGA5 316 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 MRPL48Q96GC5 212 aaKnown RBP18.78■□□□□ 0.6
TPM1-208ENST00000404484 OR5M11Q96RB7 305 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 ALG12Q9BV10 488 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 ISYNA1Q9NPH2 558 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 ERVK13-1Q9NX77 482 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 ENPP5Q9UJA9 477 aa18.78■□□□□ 0.6
TPM1-208ENST00000404484 CAB39Q9Y376 341 aaPredicted RBP18.78■□□□□ 0.6
TPM1-208ENST00000404484 DAPL1A0PJW8 107 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 CD36P16671 472 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 CRABP1P29762 137 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 CAPZA2P47755 286 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 GFRA1P56159 465 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 H3F3AP84243 136 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 MLLT11Q13015 90 aaPredicted RBP18.77■□□□□ 0.6
TPM1-208ENST00000404484 EEF1A1P5Q5VTE0 462 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 DNM1P34Q6PK57 102 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 B3GLCTQ6Y288 498 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 KDM8Q8N371 416 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 TM9SF4Q92544 642 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 SYT4Q9H2B2 425 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 B3GAT1Q9P2W7 334 aa18.77■□□□□ 0.6
TPM1-208ENST00000404484 TRAV17A0A0B4J275 112 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 A0A0J9YW62 118 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 SCG5P05408 212 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 MRPL3P09001 348 aaKnown RBP18.76■□□□□ 0.59
TPM1-208ENST00000404484 OR2T7P0C7T2 308 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 HLA-DOBP13765 273 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 ZNF43P17038 809 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 CD97P48960 835 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 RAC3P60763 192 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 MELKQ14680 651 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 LHFPL3Q86UP9 236 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 PM20D2Q8IYS1 436 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 TMEM251Q8N6I4 163 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 RBMXL3Q8N7X1 1067 aaKnown RBP18.76■□□□□ 0.59
TPM1-208ENST00000404484 OR2T27Q8NH04 317 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 TIGARQ9NQ88 270 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 PRRC2CQ9Y520 2896 aaKnown RBP18.76■□□□□ 0.59
TPM1-208ENST00000404484 SLC22A23A1A5C7 686 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 H3BMQ9 156 aa18.76■□□□□ 0.59
TPM1-208ENST00000404484 H7C1C5 153 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms