RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 RPIAP49247 311 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 CSNK1EP49674 416 aaKnown RBP11.88□□□□□ -0.51
CCBE1-201ENST00000398179 SLC35B1P78383 322 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 GLYATL3Q5SZD4 288 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 DNAJC5GQ8N7S2 189 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 RNF128Q8TEB7 428 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 DNAJA3Q96EY1 480 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 AMBNQ9NP70 447 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 SIRT5Q9NXA8 310 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 KDM4EB2RXH2 506 aaPredicted RBP11.88□□□□□ -0.51
CCBE1-201ENST00000398179 TMEM128Q5BJH2 165 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 UBE2NLQ5JXB2 153 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 ZNF572Q7Z3I7 529 aaPredicted RBP11.88□□□□□ -0.51
CCBE1-201ENST00000398179 CYP2W1Q8TAV3 490 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 PRR7Q8TB68 274 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 PHOSPHO1Q8TCT1 267 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 CD200R1Q8TD46 325 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 SPSB1Q96BD6 273 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.88□□□□□ -0.51
CCBE1-201ENST00000398179 ELOVL5Q9NYP7 299 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 OR51B2Q9Y5P1 312 aa11.88□□□□□ -0.51
CCBE1-201ENST00000398179 AOC2O75106 756 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 TACSTD2P09758 323 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SSR2P43308 183 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 IKZF1Q13422 519 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 ENPP6Q6UWR7 440 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 IRF2BP2Q7Z5L9 587 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SLC51AQ86UW1 340 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 OR9Q2Q8NGE9 314 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 NKD2Q969F2 451 aaPredicted RBP11.87□□□□□ -0.51
CCBE1-201ENST00000398179 HHIPQ96QV1 700 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 NMNAT2Q9BZQ4 307 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 H7BY64 318 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 ERI3O43414 337 aaKnown RBP11.87□□□□□ -0.51
CCBE1-201ENST00000398179 DUSP1P28562 367 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 TGIF2LYQ8IUE0 185 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 PRAP1Q96NZ9 151 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SPIN2AQ99865 258 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SPIN2BQ9BPZ2 258 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 GALNT9Q9HCQ5 603 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SOCS6O14544 535 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 OGG1O15527 345 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 CST4P01036 141 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SRP14P37108 136 aaKnown RBP11.87□□□□□ -0.51
CCBE1-201ENST00000398179 RNF144AP50876 292 aaPredicted RBP11.87□□□□□ -0.51
CCBE1-201ENST00000398179 CAPSQ13938 189 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 ZNF74Q16587 644 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 C9orf50Q5SZB4 431 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 OPN5Q6U736 354 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SLC26A10Q8NG04 563 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 FOXJ1Q92949 421 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 AGPAT4Q9NRZ5 378 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 BOKQ9UMX3 212 aaPredicted RBP11.87□□□□□ -0.51
CCBE1-201ENST00000398179 QRICH2Q9H0J4 1663 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 CATP04040 527 aaKnown RBP11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SOX8P57073 446 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 TGFBR3Q03167 851 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SRSF4Q08170 494 aaKnown RBP11.87□□□□□ -0.51
CCBE1-201ENST00000398179 LRRC26Q2I0M4 334 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 SP8Q8IXZ3 490 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 LINC00471Q8N535 108 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 TFAP2CQ92754 450 aa11.87□□□□□ -0.51
CCBE1-201ENST00000398179 TMPRSS11DO60235 418 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 HTR1BP28222 390 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 CXCL9Q07325 125 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 GALNT10Q86SR1 603 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 PRDM12Q9H4Q4 367 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 CWH43Q9H720 699 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 POMT2Q9UKY4 750 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 STYXL1Q9Y6J8 313 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 VEGFDO43915 354 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 NEXMIFQ5QGS0 1516 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 WSCD1Q658N2 575 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 LRP11Q86VZ4 500 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 OR5AU1Q8NGC0 362 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 FAM46BQ96A09 425 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 ZBP1Q9H171 429 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 FBXO44Q9H4M3 255 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 THSD1Q9NS62 852 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 USP3Q9Y6I4 520 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 ACTL6BO94805 426 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 ZNF30P17039 623 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 DRD5P21918 477 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 YPEL5P62699 121 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 CACNG1Q06432 222 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 SPATA45Q537H7 98 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 FOXB2Q5VYV0 432 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 MDGA2Q7Z553 956 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 ZDHHC14Q8IZN3 488 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 HJURPQ8NCD3 748 aaPredicted RBP11.86□□□□□ -0.51
CCBE1-201ENST00000398179 LRTM1Q9HBL6 345 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 TVP23BQ9NYZ1 205 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 ISG15P05161 165 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 DVL1P1P54792 670 aaPredicted RBP11.86□□□□□ -0.51
CCBE1-201ENST00000398179 PJVKQ0ZLH3 352 aa11.86□□□□□ -0.51
CCBE1-201ENST00000398179 ST3GAL3Q11203 375 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms