RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GRPRP30550 384 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 EMDP50402 254 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 PDZK1IP1Q13113 114 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 FHL1Q13642 323 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 C2orf68Q2NKX9 166 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 GXYLT1Q4G148 440 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 FCRLAQ7L513 359 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 OVCH1Q7RTY7 1134 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 CDRT4Q8N9R6 151 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 DNAAF1Q8NEP3 725 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 OR2AK2Q8NG84 335 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 GFI1Q99684 422 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 KIR3DX1Q9H7L2 352 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 ZNF629Q9UEG4 869 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 IER3IP1Q9Y5U9 82 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 COLEC10Q9Y6Z7 277 aa14.58□□□□□ -0.08
CHMP1A-201ENST00000397901 A0A1W2PQU0 124 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 C5orf52A6NGY3 159 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 RFPL4AA6NLU0 287 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 RFPL4AL1F8VTS6 287 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 PIN1P1O15428 100 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 KAT7O95251 611 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 SRMP19623 302 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 ACTA2P62736 377 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 ACTG2P63267 376 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 SMCO1Q147U7 214 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 C2orf27AQ580R0 203 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 FAM199XQ6PEV8 388 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 RD3Q7Z3Z2 195 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 OR5T3Q8NGG3 340 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 NT5CQ8TCD5 201 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 SLC25A28Q96A46 364 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 SLC25A38Q96DW6 304 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 PHYHIPLQ96FC7 376 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 GPR174Q9BXC1 333 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 PLA2G2FQ9BZM2 168 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 SRMSQ9H3Y6 488 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 DUSP22Q9NRW4 184 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 ANKRD10Q9NXR5 420 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 YBX2Q9Y2T7 364 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 A0A087WV48 116 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 TO15178 435 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 SLC31A1O15431 190 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 OR2T7P0C7T2 308 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 SELLP14151 372 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 PPIAP62937 165 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 BLOC1S1P78537 153 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 SORDQ00796 357 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 RNF212Q495C1 297 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 ALG10BQ5I7T1 473 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 STPG1Q5TH74 334 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 RPL22L1Q6P5R6 122 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 TSSK4Q6SA08 328 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 SLC36A1Q7Z2H8 476 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 OR6K6Q8NGW6 343 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 OR2T27Q8NH04 317 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 OR14C36Q8NHC7 312 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 PHOSPHO1Q8TCT1 267 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 NCDNQ9UBB6 729 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 DOCK8Q8NF50 2099 aa14.57□□□□□ -0.08
CHMP1A-201ENST00000397901 MCIDASD6RGH6 385 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 BRINP1O60477 761 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 VSIG10L2P0DP72 767 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 OR2W3Q7Z3T1 314 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 SYS1Q8N2H4 156 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 OR10G6Q8NH81 332 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 ZPLD1Q8TCW7 415 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 OR2A5Q96R48 311 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 FAM117AQ9C073 453 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 CHRNA9Q9UGM1 479 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 PCDHB10Q9UN67 800 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 A0A1B0GVT2 93 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 FAM171A2A8MVW0 826 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 ZNF879B4DU55 563 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 AGTR1P30556 359 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 HABP2Q14520 560 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 DCAF12L2Q5VW00 463 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 H3F3CQ6NXT2 135 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 HSPA12BQ96MM6 686 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 NMNAT3Q96T66 252 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 APOOQ9BUR5 198 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 SLC17A9Q9BYT1 436 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 RSPH9Q9H1X1 276 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 PRMT8Q9NR22 394 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 C2orf42Q9NWW7 574 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 TAS2R10Q9NYW0 307 aa14.56□□□□□ -0.08
CHMP1A-201ENST00000397901 KANTRA0A1W2PQU2 76 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 OR14I1A6ND48 311 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 IFITM5A6NNB3 132 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 PYCARD-AS1I3L0S3 204 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 SMIM10L1P0DMW3 83 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 RPL4P36578 427 aaKnown RBP14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 ZNF124Q15973 351 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 C3orf33Q6P1S2 294 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 NUDT18Q6ZVK8 323 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 BOLLQ8N9W6 283 aaKnown RBP14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 OR1S2Q8NGQ3 325 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 CCL4L1Q8NHW4 92 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 SMIM10Q96HG1 83 aa14.55□□□□□ -0.08
CHMP1A-201ENST00000397901 RNF122Q9H9V4 155 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms