RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 IGHMP01871 453 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 ZNF26P17031 533 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 HOXB6P17509 224 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 RPL4P36578 427 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 CLRN1P58418 232 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 ARF1P84077 181 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 TBRG1Q3YBR2 411 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 C1orf146Q5VVC0 180 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 SSX8Q7RTT4 187 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 WDR31Q8NA23 367 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 OR9Q2Q8NGE9 314 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 PLPPR2Q96GM1 343 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 HS3ST6Q96QI5 342 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 STX18Q9P2W9 335 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 AMDHD2Q9Y303 409 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 U3KQV3 271 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 MAST4O15021 2626 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 A0A096LPE4 126 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 A0A1W2PPR1 153 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 A0A1W2PPZ6 126 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 ZNF99A8MXY4 864 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 TRMUO75648 421 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 SEC14L2O76054 403 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 CST1P01037 141 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 ACADSP16219 412 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 FPR3P25089 353 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 LOXP28300 417 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 NR1H2P55055 460 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 RPL27P61353 136 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 TAF11Q15544 211 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 PGBD2Q6P3X8 592 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 ANKRD16Q6P6B7 361 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 FANK1Q8TC84 345 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 BCL2L2Q92843 193 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 TSPAN32Q96QS1 320 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 KATNB1Q9BVA0 655 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 NELFAQ9H3P2 528 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 NPAP1Q9NZP6 1156 aa18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 ZNF346Q9UL40 294 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-206ENST00000397408 FKBP6O75344 327 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 PTP4A3O75365 173 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 CCNB2O95067 398 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 NDUFB2O95178 105 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 ROS1P08922 2347 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 ERVK-25P63136 954 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 C1orf94Q6P1W5 598 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 LINC00471Q8N535 108 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 SYT14Q8NB59 555 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 BOD1Q96IK1 185 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 IL20RAQ9UHF4 553 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 ADAM18Q9Y3Q7 739 aa18.56■□□□□ 0.56
TSPAN4-206ENST00000397408 LRBAP50851 2863 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 CADP27708 2225 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 CENPBD1B2RD01 187 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 CIB2O75838 187 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 CD14P08571 375 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 ACVR1BP36896 505 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 GSSP48637 474 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 ZNF83P51522 516 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 FXYD6P3P58550 94 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 UBE2NP61088 152 aaKnown RBP18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 MYBPC1Q00872 1141 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 FAM205BPQ63HN1 556 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 THSD4Q6ZMP0 1018 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 ZNF519Q8TB69 540 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 GNPDA2Q8TDQ7 276 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 NRGNQ92686 78 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 HDAC2Q92769 488 aaKnown RBP18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 C1QTNF6Q9BXI9 259 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 MRPL13Q9BYD1 178 aaKnown RBP18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 ESRP2Q9H6T0 727 aaKnown RBP18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 YY1AP1Q9H869 796 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 POFUT2Q9Y2G5 429 aa18.55■□□□□ 0.56
TSPAN4-206ENST00000397408 GNGT2O14610 69 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 WNT11O96014 354 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 QDPRP09417 244 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 TUBA1BP68363 451 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 TUBA4AP68366 448 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 HIST3H3Q16695 136 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 NCMAPQ5T1S8 102 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 ZNF770Q6IQ21 691 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 LRFN4Q6PJG9 635 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 SMARCD3Q6STE5 483 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 TUBA1AQ71U36 451 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 PAPD5Q8NDF8 572 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 MAGEE2Q8TD90 523 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 UTP4Q969X6 686 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 SLCO4A1Q96BD0 722 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 GPX7Q96SL4 187 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 FOXB1Q99853 325 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 OBP2BQ9NPH6 170 aa18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 CCM2LQ9NUG4 571 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 MAGED1Q9Y5V3 778 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 ANKRD17O75179 2603 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-206ENST00000397408 DPRXA6NFQ7 191 aa18.53■□□□□ 0.56
TSPAN4-206ENST00000397408 A6NIZ1 184 aa18.53■□□□□ 0.56
TSPAN4-206ENST00000397408 DHHO43323 396 aa18.53■□□□□ 0.56
TSPAN4-206ENST00000397408 B4GALT1P15291 398 aa18.53■□□□□ 0.56
TSPAN4-206ENST00000397408 IST1P53990 364 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms