RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 DDOSTP39656 456 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 SUMO1P63165 101 aaKnown RBP12.94□□□□□ -0.34
COL4A3-202ENST00000396578 ZNF239Q16600 458 aaKnown RBP12.94□□□□□ -0.34
COL4A3-202ENST00000396578 SNX11Q9Y5W9 270 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 PIAS3Q9Y6X2 628 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 PRSS38A1L453 326 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 RGS11O94810 467 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 OR1D4P47884 311 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 CLDN17P56750 224 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 RAB6CQ53S08 254 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 OR5K2Q8NHB8 316 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 OR10J5Q8NHC4 309 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 LIPHQ8WWY8 451 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 FAM3DQ96BQ1 224 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 CLSTN3Q9BQT9 956 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 RAB6CQ9H0N0 254 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 DECR2Q9NUI1 292 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 SPHK1Q9NYA1 384 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 H2AFB1P0C5Y9 115 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 ADPRMQ3LIE5 342 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 UTP4Q969X6 686 aaKnown RBP12.94□□□□□ -0.34
COL4A3-202ENST00000396578 SOX7Q9BT81 388 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 M0QYG6 137 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 FABP1P07148 127 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 PTAFRP25105 342 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 SLC35A1P78382 337 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 TNFRSF17Q02223 184 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 ADAM5Q6NVV9 412 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 PIANPQ8IYJ0 282 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 C2CD4CQ8TF44 421 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 DCLRE1CQ96SD1 692 aaKnown RBP12.94□□□□□ -0.34
COL4A3-202ENST00000396578 OR6C68A6NDL8 312 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 LGALS8O00214 317 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 JTBO76095 146 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 ICAM2P13598 275 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 ZP2Q05996 745 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.94□□□□□ -0.34
COL4A3-202ENST00000396578 C1orf220Q5T0J3 134 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 MARCH8Q5T0T0 291 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 DPY19L2P2Q6ZN68 376 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 GRAMD2AQ8IUY3 354 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 ASB11Q8WXH4 323 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 HRASLS5Q96KN8 279 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 SLAMF8Q9P0V8 285 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 CLCF1Q9UBD9 225 aa12.94□□□□□ -0.34
COL4A3-202ENST00000396578 HEMK1Q9Y5R4 338 aaPredicted RBP12.94□□□□□ -0.34
COL4A3-202ENST00000396578 CRYM-AS1A6NIL9 109 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 TO15178 435 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 AIFM1O95831 613 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 MAKP20794 623 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 UBE2G1P62253 170 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ZNF620Q6ZNG0 422 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 HSD11B1LQ7Z5J1 315 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 OR5D18Q8NGL1 313 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 OR5M8Q8NGP6 311 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ELF4Q99607 663 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ADAM29Q9UKF5 820 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 TRDV1A0A1B0GX56 115 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ZNF724A8MTY0 619 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 UMAD1C9J7I0 102 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 PAPLNO95428 1278 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 IL4RP24394 825 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 BTG1P62324 171 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 SPRED1Q7Z699 444 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 SLC25A46Q96AG3 418 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 WDR83Q9BRX9 315 aaKnown RBP12.93□□□□□ -0.34
COL4A3-202ENST00000396578 TMEM184BQ9Y519 407 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-202ENST00000396578 C7orf72A4D263 438 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 TRABD2BA6NFA1 517 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 CD46P15529 392 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 NPY4RP50391 375 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 WDR88Q6ZMY6 472 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 H2BFWTQ7Z2G1 175 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 FAM96BQ9Y3D0 163 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ACTL7AQ9Y615 435 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 CBY3A6NI87 242 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 SPINT2O43291 252 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 RBPJQ06330 500 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 C12orf76Q8N812 135 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-202ENST00000396578 M1APQ8TC57 530 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 PLEKHF2Q9H8W4 249 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 GMPR2Q9P2T1 348 aaKnown RBP12.93□□□□□ -0.34
COL4A3-202ENST00000396578 DIMT1Q9UNQ2 313 aaKnown RBP12.93□□□□□ -0.34
COL4A3-202ENST00000396578 A0A1W2PPH5 198 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 DCTN6O00399 190 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 AQP7O14520 342 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 B3GALNT1O75752 331 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ATP1B1P05026 303 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ELLP55199 621 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-202ENST00000396578 SYT9Q86SS6 491 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ZNF384Q8TF68 577 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ZNF586Q9NXT0 402 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 GAR1Q9NY12 217 aaKnown RBP12.93□□□□□ -0.34
COL4A3-202ENST00000396578 MAOBP27338 520 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 DEFB133Q30KQ1 61 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 C9orf135Q5VTT2 229 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 CICQ96RK0 1608 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-202ENST00000396578 ZNF587BE7ETH6 402 aa12.93□□□□□ -0.34
COL4A3-202ENST00000396578 TAAR5O14804 337 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms