RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 SUSD5O60279 629 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 RNH1P13489 461 aaKnown RBP18.74■□□□□ 0.59
CLK3-202ENST00000395066 MST1P26927 711 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 MAOBP27338 520 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 MED25Q71SY5 747 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 OR5AK2Q8NH90 309 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 S100A16Q96FQ6 103 aaKnown RBP18.74■□□□□ 0.59
CLK3-202ENST00000395066 MEIS3P1A6NDR6 274 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 EFCAB7A8K855 629 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 PRAMEF2O60811 474 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 GRK6P43250 576 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 OC90Q02509 493 aaPredicted RBP18.74■□□□□ 0.59
CLK3-202ENST00000395066 EIF2B5Q13144 721 aaKnown RBP18.74■□□□□ 0.59
CLK3-202ENST00000395066 HLXQ14774 488 aaPredicted RBP18.74■□□□□ 0.59
CLK3-202ENST00000395066 ALG10Q5BKT4 473 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 MANEAQ5SRI9 462 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 ARMC6Q6NXE6 501 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 ALKAL2Q6UX46 152 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 OVCH2Q7RTZ1 564 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 FAM122BQ7Z309 247 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 PRR22Q8IZ63 422 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 C19orf47Q8N9M1 422 aaKnown RBP18.74■□□□□ 0.59
CLK3-202ENST00000395066 G6PC3Q9BUM1 346 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 ZC4H2Q9NQZ6 224 aa18.74■□□□□ 0.59
CLK3-202ENST00000395066 POM121CA8CG34 1229 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 SNRPGP15A8MWD9 76 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 KRBOX1C9JBD0 128 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 WISP1O95388 367 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 IL5P05113 134 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 FBXO45P0C2W1 286 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 ADH7P40394 386 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 MAZP56270 477 aaKnown RBP18.73■□□□□ 0.59
CLK3-202ENST00000395066 UBE2MP61081 183 aaKnown RBP18.73■□□□□ 0.59
CLK3-202ENST00000395066 EGR4Q05215 589 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 ZNF74Q16587 644 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 SLC35D3Q5M8T2 416 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 YOD1Q5VVQ6 348 aaPredicted RBP18.73■□□□□ 0.59
CLK3-202ENST00000395066 GLB1L2Q8IW92 636 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 ATOH1Q92858 354 aaPredicted RBP18.73■□□□□ 0.59
CLK3-202ENST00000395066 KTI12Q96EK9 354 aaPredicted RBP18.73■□□□□ 0.59
CLK3-202ENST00000395066 MMABQ96EY8 250 aaPredicted RBP18.73■□□□□ 0.59
CLK3-202ENST00000395066 UTP23Q9BRU9 249 aaKnown RBP18.73■□□□□ 0.59
CLK3-202ENST00000395066 MTIF3Q9H2K0 278 aaKnown RBP18.73■□□□□ 0.59
CLK3-202ENST00000395066 PFDN2Q9UHV9 154 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 SEC16AO15027 2179 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 A0A1B0GTQ1 180 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 CTNSO60931 367 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 B3GALNT1O75752 331 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 AKR7A3O95154 331 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 S100A11P31949 105 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 TAS2R20P59543 309 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 HYAL1Q12794 435 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 MAMSTRQ6ZN01 415 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 DPY19L4Q7Z388 723 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 OR6N2Q8NGY6 317 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 RPS4Y2Q8TD47 263 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 LRFN5Q96NI6 719 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 AMELYQ99218 206 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 MAP3K3Q99759 626 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 SEMA6CQ9H3T2 930 aa18.73■□□□□ 0.59
CLK3-202ENST00000395066 NDUFB6O95139 128 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 LPLP06858 475 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 ITPKBP27987 946 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 SEC61A1P61619 476 aaKnown RBP18.72■□□□□ 0.59
CLK3-202ENST00000395066 ALKBH1Q13686 389 aaKnown RBP18.72■□□□□ 0.59
CLK3-202ENST00000395066 GRM7Q14831 915 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 Q499Y3 187 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 FAM220AQ7Z4H9 259 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 SLC43A2Q8N370 569 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 LPAR4Q99677 370 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 A8MXK9 166 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 RP2O75695 350 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 EFNB2P52799 333 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 PRPS1P60891 318 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 MRPS10P82664 201 aaKnown RBP18.72■□□□□ 0.59
CLK3-202ENST00000395066 CBFBQ13951 182 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 DND1Q8IYX4 353 aaKnown RBP18.72■□□□□ 0.59
CLK3-202ENST00000395066 ZSCAN1Q8NBB4 408 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 OR4D10Q8NGI6 311 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 SCARB1Q8WTV0 552 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 DPYSL5Q9BPU6 564 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 RTN4RQ9BZR6 473 aa18.72■□□□□ 0.59
CLK3-202ENST00000395066 MS4A7Q9GZW8 240 aaPredicted RBP18.72■□□□□ 0.59
CLK3-202ENST00000395066 ARPC5O15511 151 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 SIX6O95475 246 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 HIST1H2ABP04908 130 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 PROS1P07225 676 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 CD14P08571 375 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 RAB40ALP0C0E4 278 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 HPGDP15428 266 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 GABRG2P18507 467 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 MECP2P51608 486 aaKnown RBP18.71■□□□□ 0.59
CLK3-202ENST00000395066 ART1P52961 327 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 RPL18Q07020 188 aaKnown RBP18.71■□□□□ 0.59
CLK3-202ENST00000395066 MESTQ5EB52 335 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 HIST3H2AQ7L7L0 130 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 SLC16A9Q7RTY1 509 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 EXD3Q8N9H8 876 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 RAB40AQ8WXH6 277 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 HIST1H2ACQ93077 130 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms