RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GNG13Q9P2W3 67 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 LOXL2Q9Y4K0 774 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 PCDHGA5Q9Y5G8 931 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 TARM1B6A8C7 271 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 PRRT4C9JH25 899 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 MED6O75586 246 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 PPIAP62937 165 aaKnown RBP9.57□□□□□ -0.88
COL4A6-203ENST00000394872 AARDQ4LEZ3 155 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 LSMEM2Q8N112 164 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 DNAJC5GQ8N7S2 189 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 BHLHE23Q8NDY6 225 aa9.57□□□□□ -0.88
COL4A6-203ENST00000394872 RGS11O94810 467 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 MT-ATP6P00846 226 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 NDUFB7P17568 137 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 TGM4P49221 684 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 ETFBKMTQ8IXQ9 262 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CPEB3Q8NE35 698 aaKnown RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 UTP4Q969X6 686 aaKnown RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 HRH4Q9H3N8 390 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF225Q9UK10 706 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 OR52A1Q9UKL2 312 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 BTAF1O14981 1849 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 PHIPQ8WWQ0 1821 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 TMEM82A0PJX8 343 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 PLPP1O14494 284 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 EIF4E2O60573 245 aaKnown RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CRYZL1O95825 349 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 UBBP0CG47 229 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CHRNB1P11230 501 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 SELEP16581 610 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 RAD52P43351 418 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 RPS27AP62979 156 aaKnown RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 UBA52P62987 128 aaKnown RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 FAPQ12884 760 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 POU4F3Q15319 338 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 OR8G1Q15617 311 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 ATPAF1Q5TC12 328 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 OLIG3Q7RTU3 272 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 TMPRSS7Q7RTY8 843 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 PATE1Q8WXA2 126 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CPNE4Q96A23 557 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 SLC35A4Q96G79 324 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 LUZP4Q9P127 313 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 PRELID3BQ9Y3B1 194 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 MEIOCA2RUB1 952 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 K7EPK0 472 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 DEGS1O15121 323 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CLDN1O95832 211 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 ALPLP05186 524 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 RPL11P62913 178 aaKnown RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 MEP1BQ16820 701 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 Q499Y3 187 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 LPCAT3Q6P1A2 487 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF546Q86UE3 836 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 WDR5BQ86VZ2 330 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 MAML2Q8IZL2 1156 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 FAM71E2Q8N5Q1 922 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 SLC25A43Q8WUT9 341 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 C11orf40Q8WZ69 217 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 TMEM106AQ96A25 262 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 PRR14Q9BWN1 585 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 OR51B4Q9Y5P0 310 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 POM121BA6NF01 834 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 SYT5O00445 386 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 LINC01565O15544 149 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 SELENOFO60613 162 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CNIH1O95406 144 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CLEC3BP05452 202 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 OMGP23515 440 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 HTR1FP30939 366 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF93P35789 620 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 SORDQ00796 357 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 MYBPHQ13203 477 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 RBMS2Q15434 407 aaKnown RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 FAM71E1Q6IPT2 247 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 IDO2Q6ZQW0 420 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 LGALS14Q8TCE9 139 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 P2RY12Q9H244 342 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 KLF13Q9Y2Y9 288 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 OR6C76A6NM76 312 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 C4orf47A7E2U8 309 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 H7C1Q1 480 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CD14P08571 375 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF728P0DKX0 622 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CT45A6P0DMU7 189 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CT45A5P0DMU8 189 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CT45A7P0DMV0 189 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CT45A8P0DMV1 189 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CT45A9P0DMV2 189 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 BCKDHBP21953 392 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CCR5P51681 352 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 SPCS2Q15005 226 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 GLYR1Q49A26 553 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CT45A2Q5DJT8 189 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CT45A1Q5HYN5 189 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 SLC16A11Q8NCK7 471 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 CT45A3Q8NHU0 189 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 TCTEX1D2Q8WW35 142 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 UHRF2Q96PU4 802 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms