RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SLC2A1P11166 492 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 FCARP24071 287 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 OR3A2P47893 321 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 PPP1CAP62136 330 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 UBE2NLQ5JXB2 153 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 C3orf33Q6P1S2 294 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 OR4C16Q8NGL9 310 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 NUDT22Q9BRQ3 303 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 TBL1XR1Q9BZK7 514 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 BCL2L14Q9BZR8 327 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 TMEM74BQ9NUR3 256 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 OBSL1O75147 1896 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 TCRBV21S2A2A0A5A6 115 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 MED19A0JLT2 244 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-202ENST00000394820 UGT2B7P16662 529 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 MAOAP21397 527 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 CDK5R1Q15078 307 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 GLYATL3Q5SZD4 288 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 CCDC36Q8IYA8 594 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 CCDC107Q8WV48 283 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 MOAP1Q96BY2 351 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 S100A13Q99584 98 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 VRK1Q99986 396 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-202ENST00000394820 RAB11FIP5Q9BXF6 653 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 ZNF230Q9UIE0 474 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-202ENST00000394820 ARRDC5A6NEK1 342 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 SCDO00767 359 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 CXCL2P19875 107 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 AVPR2P30518 371 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 PRKAR1BP31321 381 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 FRKP42685 505 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-202ENST00000394820 P2RX1P51575 399 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 UBE2IP63279 158 aaKnown RBP12.08□□□□□ -0.48
NFKB1-202ENST00000394820 IL13RA1P78552 427 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 GPR18Q14330 331 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 GPR139Q6DWJ6 353 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 IL17RCQ8NAC3 791 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 OR51A4Q8NGJ6 313 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 CD300LFQ8TDQ1 290 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 POFUT1Q9H488 388 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 MBD2Q9UBB5 411 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 ZNF736B4DX44 427 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-202ENST00000394820 H3BML4 177 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 P2RX6O15547 441 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 CTSVO60911 334 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 HOXB5P09067 269 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 GIMD1P0DJR0 217 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 NDUFS1P28331 727 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 AKT2P31751 481 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 ZNF85Q03923 595 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 RAB11BQ15907 218 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 RPL22L1Q6P5R6 122 aaKnown RBP12.08□□□□□ -0.48
NFKB1-202ENST00000394820 CORO6Q6QEF8 472 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 KIRREL2Q6UWL6 708 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 USP53Q70EK8 1073 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 WDR92Q96MX6 357 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 UPB1Q9UBR1 384 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 GPR160Q9UJ42 338 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 CYP8B1Q9UNU6 501 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 NPFFR2Q9Y5X5 522 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 PIAS3Q9Y6X2 628 aa12.08□□□□□ -0.48
NFKB1-202ENST00000394820 MEIKINA0A087WXM9 373 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 TMEM82A0PJX8 343 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 NID1P14543 1247 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 SMCO1Q147U7 214 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 TRAM1Q15629 374 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 ULK3Q6PHR2 472 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 COX15Q7KZN9 410 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 PM20D2Q8IYS1 436 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 SAMD14Q8IZD0 417 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-202ENST00000394820 MUC20Q8N307 709 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-202ENST00000394820 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 SCMH1Q96GD3 660 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 ZC3H10Q96K80 434 aaKnown RBP12.07□□□□□ -0.48
NFKB1-202ENST00000394820 AIFM2Q9BRQ8 373 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 POTEKPQ9BYX7 375 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 MSRAQ9UJ68 235 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 ELF5Q9UKW6 265 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-202ENST00000394820 SIGLEC7Q9Y286 467 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 PCDHGA5Q9Y5G8 931 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 DENND4CQ5VZ89 1909 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 K7EQS6 105 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 IL12BP29460 328 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 CAPZA1P52907 286 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 BTG2P78543 158 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 FGL1Q08830 312 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 ZNF616Q08AN1 781 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 HLXQ14774 488 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-202ENST00000394820 C1orf189Q5VU69 101 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 DCAF12L2Q5VW00 463 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 TMEM205Q6UW68 189 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 Q6ZSR6 202 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 OR4C3Q8NH37 302 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 TMED6Q8WW62 240 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 MAFIPQ8WZ33 124 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 ZBTB8AQ96BR9 441 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 CMBLQ96DG6 245 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 AHCYL2Q96HN2 611 aaKnown RBP12.07□□□□□ -0.48
NFKB1-202ENST00000394820 TIMM29Q9BSF4 260 aa12.07□□□□□ -0.48
NFKB1-202ENST00000394820 MENTQ9BUN1 341 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms