RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 UTS2O95399 124 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF250P15622 560 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 GRK6P43250 576 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 SKP1P63208 163 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 IGLV3-21P80748 117 aaPredicted RBP12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 CLPPQ16740 277 aaPredicted RBP12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 TMEM69Q5SWH9 247 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 TTLL10Q6ZVT0 673 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF595Q8IYB9 648 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 PRSS35Q8N3Z0 413 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 SPEM1Q8N4L4 309 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 THEM6Q8WUY1 208 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 PMM1Q92871 262 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 SHDQ96IW2 340 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 WNT16Q9UBV4 365 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 KCNG2Q9UJ96 466 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 GMEB2Q9UKD1 530 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 FKBP7Q9Y680 259 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 ICMTO60725 284 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 KDM4BO94953 1096 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 TPOP07202 933 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 CD14P08571 375 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 UBL4AP11441 157 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 HPGDP15428 266 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 CD1CP29017 333 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 ETFDHQ16134 617 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 C2orf68Q2NKX9 166 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 LRRTM1Q86UE6 522 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 SLC35F3Q8IY50 421 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 OR5AK2Q8NH90 309 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 RPS4Y2Q8TD47 263 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 SYNDIG1Q9H7V2 258 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 UCK1Q9HA47 277 aa12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 PPIEQ9UNP9 301 aaKnown RBP12.21□□□□□ -0.45
GTF2F1-201ENST00000394456 PEX14O75381 377 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 KRT33AO76009 404 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 SIX6O95475 246 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 ITPKBP27987 946 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 BLVRAP53004 296 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 C19orf57Q0VDD7 668 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 ALKBH1Q13686 389 aaKnown RBP12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 EXOSC2Q13868 293 aaKnown RBP12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 CSRP2Q16527 193 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 TOR2AQ5JU69 321 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 TSSK4Q6SA08 328 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 MARCH3Q86UD3 253 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 OR56B4Q8NH76 319 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC25A36Q96CQ1 311 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF285Q96NJ3 590 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 OR1F2PQ96R84 312 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF436Q9C0F3 470 aaPredicted RBP12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 CHRDQ9H2X0 955 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC22A13Q9Y226 551 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 HIF3AQ9Y2N7 669 aa12.21□□□□□ -0.46
GTF2F1-201ENST00000394456 TMEM150CB9EJG8 249 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 PPM1BO75688 479 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 ALDOBP05062 364 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 ASAH2BP0C7U1 165 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 PSMB1P20618 241 aaKnown RBP12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 CENPAP49450 140 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC37A1P57057 533 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 TAS2R20P59543 309 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 CFHR1Q03591 330 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 MEP1BQ16820 701 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 OGFOD3Q6PK18 319 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 LRRN1Q6UXK5 716 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 C16orf47Q6ZP98 133 aaPredicted RBP12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 LUZP2Q86TE4 346 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 CMIPQ8IY22 773 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 DND1Q8IYX4 353 aaKnown RBP12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 KDM8Q8N371 416 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 FTMTQ8N4E7 242 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF563Q8TA94 476 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 ZDHHC12Q96GR4 267 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 SORCS2Q96PQ0 1159 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 CDX2Q99626 313 aaPredicted RBP12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 NPAS1Q99742 590 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 RANBP3Q9H6Z4 567 aaPredicted RBP12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 TCF7L1Q9HCS4 588 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 BCAT2O15382 392 aaPredicted RBP12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 SDHAP31040 664 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF117Q03924 483 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 ZP2Q05996 745 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 DYRK1AQ13627 763 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 WBP2NLQ6ICG8 309 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 FAM198BQ6UWH4 519 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC16A9Q7RTY1 509 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 BPHLQ86WA6 291 aaPredicted RBP12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 CDC20BQ86Y33 519 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 RBP7Q96R05 134 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 TRAF4Q9BUZ4 470 aaPredicted RBP12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 PRDM6Q9NQX0 595 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 MYEF2Q9P2K5 600 aaKnown RBP12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 GTF2A1LQ9UNN4 478 aa12.2□□□□□ -0.46
GTF2F1-201ENST00000394456 ZSCAN5BA6NJL1 495 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 OR4C45A6NMZ5 311 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 TEX46H3BTG2 121 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 CTDSPLO15194 276 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 GPRIN2O60269 458 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms