RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SLC25A25Q6KCM7 469 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 SSX6Q7RTT6 188 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 ZBTB46Q86UZ6 589 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 RFLNBQ8N5W9 214 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 SNX33Q8WV41 574 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 KCNE4Q8WWG9 221 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 C4orf36Q96KX1 117 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 ADAD1Q96M93 576 aaKnown RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 KLHL15Q96M94 604 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 EMC6Q9BV81 110 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 DCSTAMPQ9H295 470 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 BABAM2Q9NXR7 383 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 STUB1Q9UNE7 303 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 SSR3Q9UNL2 185 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 B9D1Q9UPM9 204 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 POLHQ9Y253 713 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 NOX1Q9Y5S8 564 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 IGHV3-15A0A0B4J1V0 119 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 A0A1W2PNV4 684 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 FAM166BA8MTA8 275 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 ZNF814B7Z6K7 855 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 ZNF670-ZNF695F2Z2N8 137 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 EIF1AYO14602 144 aaKnown RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 MAGEB4O15481 346 aaPredicted RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 SP1P08047 785 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 ZNF43P17038 809 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 KLK2P20151 261 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 SERPINB10P48595 397 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 OR12D2P58182 307 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 B3GALT5-AS1P59052 145 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 RPS25P62851 125 aaKnown RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 CSNK2A1P68400 391 aaPredicted RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 FOXO1Q12778 655 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 FOXC1Q12948 553 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 DGUOKQ16854 277 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 DEFB109BQ30KR1 87 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 TBC1D25Q3MII6 688 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 C19orf48Q6RUI8 117 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 USP43Q70EL4 1123 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 SLC16A9Q7RTY1 509 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 GALNTL5Q7Z4T8 443 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 UBQLNLQ8IYU4 475 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 ZNF485Q8NCK3 441 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 ADPRHL1Q8NDY3 354 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 KBTBD8Q8NFY9 601 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 OR6N2Q8NGY6 317 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 MRPL48Q96GC5 212 aaKnown RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 OXGR1Q96P68 337 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 SNX18Q96RF0 628 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 NAA11Q9BSU3 229 aaPredicted RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 TMED9Q9BVK6 235 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 TRIM36Q9NQ86 728 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 VSX1Q9NZR4 365 aaPredicted RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 KLHL13Q9P2N7 655 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 B3GAT1Q9P2W7 334 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 GNG8Q9UK08 70 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 KLF13Q9Y2Y9 288 aaPredicted RBP7.74□□□□□ -1.17
TDP1-203ENST00000393454 FKBP7Q9Y680 259 aa7.74□□□□□ -1.17
TDP1-203ENST00000393454 A0A0J9YW62 118 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 AQP7P3A6NL99 342 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 ZNF891A8MT65 544 aaPredicted RBP7.73□□□□□ -1.17
TDP1-203ENST00000393454 H0YC42 278 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 KLRC4-KLRK1H3BQV0 150 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 LRRTM2O43300 516 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 AHCYL1O43865 530 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 EIF1BO60739 113 aaKnown RBP7.73□□□□□ -1.17
TDP1-203ENST00000393454 RAMP1O60894 148 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 CTLA4P16410 223 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 POU3F2P20265 443 aaPredicted RBP7.73□□□□□ -1.17
TDP1-203ENST00000393454 CRABP1P29762 137 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 CRYBB2P43320 205 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 STARP49675 285 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 MEOX1P50221 254 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 CLDN20P56880 219 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 CLRN1P58418 232 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 ACTA2P62736 377 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 ACTG2P63267 376 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 ACSM1Q08AH1 577 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 MFAP5Q13361 173 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 CRTC2Q53ET0 693 aaPredicted RBP7.73□□□□□ -1.17
TDP1-203ENST00000393454 OTPQ5XKR4 325 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 CARD17Q5XLA6 110 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 FAM205BPQ63HN1 556 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 VASNQ6EMK4 673 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 INTS14Q96SY0 518 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 TM9SF2Q99805 663 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 OR2B2Q9GZK3 357 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 TSPAN10Q9H1Z9 355 aaPredicted RBP7.73□□□□□ -1.17
TDP1-203ENST00000393454 ZNF552Q9H707 407 aaPredicted RBP7.73□□□□□ -1.17
TDP1-203ENST00000393454 KLK13Q9UKR3 277 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 COPS3Q9UNS2 423 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 SSUH2Q9Y2M2 353 aa7.73□□□□□ -1.17
TDP1-203ENST00000393454 MRPS18CQ9Y3D5 142 aaKnown RBP7.73□□□□□ -1.17
TDP1-203ENST00000393454 NPIPB13A6NJU9 1138 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 ZNF726A6NNF4 738 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 NPIPB4C9JG80 1138 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 E9PI62 339 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 PSMD9O00233 223 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 NME2P1O60361 137 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms