RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 PCP4L1A6NKN8 68 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 VEGFCP49767 419 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 TAS2R19P59542 299 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 RNF4P78317 190 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 APOOLQ6UXV4 268 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 UCN3Q969E3 161 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 C7orf34Q96L11 122 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 AIFM2Q9BRQ8 373 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 APMAPQ9HDC9 416 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 PCDHGA3Q9Y5H0 932 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 A0A0A6YYH2 397 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 A6NJ64 397 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 SBK2P0C263 348 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 CDK2P24941 298 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 LACC1Q8IV20 430 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 ELMOD2Q8IZ81 293 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 SCGB1C1Q8TD33 95 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 RNF167Q9H6Y7 350 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 OBP2BQ9NPH6 170 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 TTLL8A6PVC2 850 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 SPI1P17947 270 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 GUSBP11Q6P575 273 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 VASH1Q7L8A9 365 aaPredicted RBP15.17■□□□□ 0.02
SCN3B-202ENST00000392770 OR2L13Q8N349 312 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 EMC6Q9BV81 110 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 CTSFQ9UBX1 484 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 GPR85P60893 370 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 ZMAT1Q5H9K5 638 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 C6orf183Q5T699 404 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 ZNF845Q96IR2 970 aaPredicted RBP15.16■□□□□ 0.02
SCN3B-202ENST00000392770 IGHV5-51A0A0C4DH38 117 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 TBX19O60806 448 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 SRMP19623 302 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 RPL18Q07020 188 aaKnown RBP15.16■□□□□ 0.02
SCN3B-202ENST00000392770 PRSS41Q7RTY9 318 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 ZNF587BE7ETH6 402 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 CPEP16870 476 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 KIR2DL1P43626 348 aaPredicted RBP15.16■□□□□ 0.02
SCN3B-202ENST00000392770 PNLIPRP2P54317 469 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 EMC4Q5J8M3 183 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 ZNF684Q5T5D7 378 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 CDCA4Q9BXL8 241 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 STEAP1Q9UHE8 339 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 TRAPPC2LH3BP13 241 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 LIPCP11150 499 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 IL32P24001 234 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 RPS19P39019 145 aaKnown RBP15.16■□□□□ 0.02
SCN3B-202ENST00000392770 MFAP5Q13361 173 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 FGFBP1Q14512 234 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 FKRPQ9H9S5 495 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 UQCRC1P31930 480 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 MECP2P51608 486 aaKnown RBP15.16■□□□□ 0.02
SCN3B-202ENST00000392770 SGPP2Q8IWX5 399 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 OR2A5Q96R48 311 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 FKBP14Q9NWM8 211 aa15.16■□□□□ 0.02
SCN3B-202ENST00000392770 ARGFXA6NJG6 315 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 B4DXG7 233 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 EFNA3P52797 238 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 MTCP1P56278 107 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 RTL6Q6ICC9 239 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 DNAJC5GQ8N7S2 189 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 ZNF709Q8N972 641 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 FGGYQ96C11 551 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 NELFAQ9H3P2 528 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 A4GNTQ9UNA3 340 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 MRPS28Q9Y2Q9 187 aaKnown RBP15.15■□□□□ 0.02
SCN3B-202ENST00000392770 MTCH2Q9Y6C9 303 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 ZNF628Q5EBL2 1059 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 OR1L3Q8NH93 324 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 NUDT9Q9BW91 350 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 C12orf49Q9H741 205 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 PCDHGA1Q9Y5H4 931 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 CHRNB1P11230 501 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 PCSK6P29122 969 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 TFF2Q03403 129 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 ACKR1Q16570 336 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 DEDD2Q8WXF8 326 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 LRFN5Q96NI6 719 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 LIN7BQ9HAP6 207 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 PRRC2BQ5JSZ5 2229 aaKnown RBP15.15■□□□□ 0.02
SCN3B-202ENST00000392770 A0A0G2JMP0 313 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 HMX3A6NHT5 357 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 DVL2O14641 736 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 PPP1CAP62136 330 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 ZNF813Q6ZN06 617 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 SMRP1Q8NCR6 262 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 OR4M2Q8NGB6 313 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 DNAJB11Q9UBS4 358 aa15.15■□□□□ 0.02
SCN3B-202ENST00000392770 A0A1W2PNR3 127 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 FKBP2P26885 142 aaKnown RBP15.14■□□□□ 0.01
SCN3B-202ENST00000392770 AKR1D1P51857 326 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 AKR1C2P52895 323 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 TNK1Q13470 666 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 CDX2Q99626 313 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-202ENST00000392770 PDCD1LG2Q9BQ51 273 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 NDUFB11Q9NX14 153 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
SCN3B-202ENST00000392770 PRAMEF27A3QJZ7 478 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 AGAP14A8MT82 685 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 ZNF814B7Z6K7 855 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms