RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 LRP11Q86VZ4 500 aa12.2□□□□□ -0.46
SHOX-202ENST00000381575 MAGEB18Q96M61 343 aa12.2□□□□□ -0.46
SHOX-202ENST00000381575 SNX18Q96RF0 628 aa12.2□□□□□ -0.46
SHOX-202ENST00000381575 RABEP2Q9H5N1 569 aa12.2□□□□□ -0.46
SHOX-202ENST00000381575 KAT8Q9H7Z6 458 aaKnown RBP12.2□□□□□ -0.46
SHOX-202ENST00000381575 MYOZ1Q9NP98 299 aaPredicted RBP12.2□□□□□ -0.46
SHOX-202ENST00000381575 TMEM160Q9NX00 188 aa12.2□□□□□ -0.46
SHOX-202ENST00000381575 MYEF2Q9P2K5 600 aaKnown RBP12.2□□□□□ -0.46
SHOX-202ENST00000381575 CMAHPQ9Y471 501 aa12.2□□□□□ -0.46
SHOX-202ENST00000381575 RNF13O43567 381 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 FMO6PO60774 539 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 SHOX2O60902 331 aaPredicted RBP12.19□□□□□ -0.46
SHOX-202ENST00000381575 OR6A2O95222 327 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 RAB36O95755 333 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 MT-ATP6P00846 226 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 PCGF2P35227 344 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 ALDH3B1P43353 468 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 RAB1AP62820 205 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 RBBP4Q09028 425 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 CCNIQ14094 377 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 ZNF74Q16587 644 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 TRMT5Q32P41 509 aaKnown RBP12.19□□□□□ -0.46
SHOX-202ENST00000381575 KRTAP24-1Q3LI83 254 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 TTC33Q6PID6 262 aaPredicted RBP12.19□□□□□ -0.46
SHOX-202ENST00000381575 SKA3Q8IX90 412 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 CCDC36Q8IYA8 594 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 TMEM158Q8WZ71 300 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 SH3GL3Q99963 347 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 OR51B6Q9H340 312 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 TAS2R5Q9NYW4 299 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 LPAR3Q9UBY5 353 aa12.19□□□□□ -0.46
SHOX-202ENST00000381575 TRAPPC13A5PLN9 417 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 VSTM5A8MXK1 200 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 HMGB1P1B2RPK0 211 aaPredicted RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 FBP2O00757 339 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 EDF1O60869 148 aaKnown RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 LILRA1O75019 489 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 ERCC1P07992 297 aaPredicted RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 UMPSP11172 480 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 ZNF35P13682 527 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 APEX1P27695 318 aaKnown RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 SEC24CP53992 1094 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 MYBPC1Q00872 1141 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 CR1LQ2VPA4 569 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 ALKBH6Q3KRA9 238 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 RABL3Q5HYI8 236 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 GKAP1Q5VSY0 366 aaPredicted RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 ZNF627Q7L945 461 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 PATL1Q86TB9 770 aaKnown RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 CARM1Q86X55 608 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 ZNF584Q8IVC4 421 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 SLC26A7Q8TE54 656 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 UBASH3BQ8TF42 649 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 TMEM54Q969K7 222 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 MRPL24Q96A35 216 aaKnown RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 NARFLQ9H6Q4 476 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 NANSQ9NR45 359 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 GLTPQ9NZD2 209 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 TRIM33Q9UPN9 1127 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 C8BP07358 591 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 CCL2P13500 99 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 GIFP27352 417 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 GZMMP51124 257 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 RUNX1T1Q06455 604 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 VMACQ2NL98 169 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 LRFN4Q6PJG9 635 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 ZNF786Q8N393 782 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 PAQR4Q8N4S7 273 aaPredicted RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 IL17RDQ8NFM7 739 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 OR6X1Q8NH79 312 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 PFN4Q8NHR9 129 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 NEU4Q8WWR8 484 aaPredicted RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 ZNF566Q969W8 418 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 PRSS27Q9BQR3 290 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 TMEM120AQ9BXJ8 343 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 EVA1AQ9H8M9 152 aa12.18□□□□□ -0.46
SHOX-202ENST00000381575 MEPEQ9NQ76 525 aaPredicted RBP12.18□□□□□ -0.46
SHOX-202ENST00000381575 BLOC1S5-TXNDC5H3BN57 136 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 M0R233 179 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 SYNGR3O43761 229 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 UBL3O95164 117 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 HPXP02790 462 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 F13BP05160 661 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 FAM157BP0CG42 384 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 PGA4P0DJD7 388 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 PGA3P0DJD8 388 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 UGT2B15P54855 530 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 GALK2Q01415 458 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 RIN1Q13671 783 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 ELFN2Q5R3F8 820 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 NANOGP8Q6NSW7 305 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 DEF8Q6ZN54 512 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 NANOGNBQ7Z5D8 188 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 NKAIN4Q8IVV8 208 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 SLC22A24Q8N4F4 322 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 SYT14Q8NB59 555 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 ZNF540Q8NDQ6 660 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 OR4K5Q8NGD3 323 aa12.17□□□□□ -0.46
SHOX-202ENST00000381575 TMEM255BQ8WV15 326 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms