RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 OR6T1Q8NGN1 323 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 SNX18Q96RF0 628 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 CGREF1Q99674 301 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 MRPL37Q9BZE1 423 aaKnown RBP14.86□□□□□ -0.03
HMGN1-204ENST00000380749 NANSQ9NR45 359 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 INTS9Q9NV88 658 aaKnown RBP14.86□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF35P13682 527 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 PCGF2P35227 344 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 NFYCQ13952 458 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF74Q16587 644 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 CR1LQ2VPA4 569 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 KRTAP24-1Q3LI83 254 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 REP15Q6BDI9 236 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 TTC33Q6PID6 262 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-204ENST00000380749 NHLRC1Q6VVB1 395 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 LINC00114Q6XXX2 140 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 SLC35D2Q76EJ3 337 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 PIWIL3Q7Z3Z3 882 aaKnown RBP14.85□□□□□ -0.03
HMGN1-204ENST00000380749 GPR32P1Q8NGA4 272 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 OR6X1Q8NH79 312 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 VANGL1Q8TAA9 524 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-204ENST00000380749 SLC26A7Q8TE54 656 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 ADAMTS16Q8TE57 1224 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 MPP4Q96JB8 637 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 MS4A5Q9H3V2 200 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 GLTPQ9NZD2 209 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF224Q9NZL3 707 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 SLC7A8Q9UHI5 535 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 TRAPPC13A5PLN9 417 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 M0QX08 132 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 KPNA4O00629 521 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-204ENST00000380749 RNF13O43567 381 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 LILRA1O75019 489 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 FARS2O95363 451 aaKnown RBP14.85□□□□□ -0.03
HMGN1-204ENST00000380749 CH25HO95992 272 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 UMPSP11172 480 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 RIN1Q13671 783 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 SELPLGQ14242 412 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 NPTX1Q15818 432 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 WDR88Q6ZMY6 472 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 WDFY1Q8IWB7 410 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 LINC01356Q8N9X3 169 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 TSPEARQ8WU66 669 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 RASSF5Q8WWW0 418 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 TMEM54Q969K7 222 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF566Q969W8 418 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF75AQ96N20 296 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 SYT3Q9BQG1 590 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 SOX7Q9BT81 388 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 SLC19A3Q9BZV2 496 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 REV1Q9UBZ9 1251 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF229Q9UJW7 825 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 SLC7A7Q9UM01 511 aa14.85□□□□□ -0.03
HMGN1-204ENST00000380749 A0A1W2PPW3 197 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 HMGB1P1B2RPK0 211 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-204ENST00000380749 HIST1H2ABP04908 130 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 IGFBP1P08833 259 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-204ENST00000380749 CD247P20963 164 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 PCMT1P22061 227 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 IL2RGP31785 369 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 ZP4Q12836 540 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 MELKQ14680 651 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 HIST3H2AQ7L7L0 130 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 NANOGNBQ7Z5D8 188 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 RETREG3Q86VR2 466 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 HIST1H2ACQ93077 130 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 THOC1Q96FV9 657 aaKnown RBP14.84□□□□□ -0.03
HMGN1-204ENST00000380749 SLC25A44Q96H78 314 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-204ENST00000380749 MAGEB18Q96M61 343 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 SIKE1Q9BRV8 207 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 C19orf24Q9BVV8 132 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF385DQ9H6B1 395 aa14.84□□□□□ -0.03
HMGN1-204ENST00000380749 KAT8Q9H7Z6 458 aaKnown RBP14.84□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF346Q9UL40 294 aaKnown RBP14.84□□□□□ -0.03
HMGN1-204ENST00000380749 OR8G3PP0DMU2 310 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 CDH15P55291 814 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 RAB39AQ14964 217 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 TRIP10Q15642 601 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 FXNQ16595 210 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 MSMPQ1L6U9 139 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 DPPA2Q7Z7J5 298 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 RBM45Q8IUH3 476 aaKnown RBP14.83□□□□□ -0.04
HMGN1-204ENST00000380749 SKA3Q8IX90 412 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 SLC22A24Q8N4F4 322 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 OR10A6Q8NH74 314 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 TAMM41Q96BW9 452 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 PCDHAC1Q9H158 963 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 C1orf198Q9H425 327 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 NPHS2Q9NP85 383 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 TMEM38BQ9NVV0 291 aa14.83□□□□□ -0.04
HMGN1-204ENST00000380749 SLC22A23A1A5C7 686 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 DHHO43323 396 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 LYPD3O95274 346 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 IGHG1P01857 330 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 SERPINA5P05154 406 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 SRP14P37108 136 aaKnown RBP14.82□□□□□ -0.04
HMGN1-204ENST00000380749 ALDH3B1P43353 468 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 GPR6P46095 362 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-204ENST00000380749 CCNIQ14094 377 aa14.82□□□□□ -0.04
HMGN1-204ENST00000380749 LIPNQ5VXI9 398 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms