RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 AKIRIN2Q53H80 203 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 KIRREL2Q6UWL6 708 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 GLDNQ6ZMI3 551 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 DEFB119Q8N690 84 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 STK35Q8TDR2 534 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 FGF14Q92915 247 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 RAB7BQ96AH8 199 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 MNTQ99583 582 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 SYNDIG1Q9H7V2 258 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 TRPV4Q9HBA0 871 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 OPN4Q9UHM6 478 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 FRYLO94915 3013 aa11.38□□□□□ -0.59
PRPF40B-202ENST00000380281 HLA-DQA2P01906 255 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 DBIP07108 87 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 BTF3P20290 206 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 NPBWR1P48145 328 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 BTG2P78543 158 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 PDZK1IP1Q13113 114 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 EIPR1Q53HC9 387 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 PARM1Q6UWI2 310 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 USP53Q70EK8 1073 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 TMPRSS12Q86WS5 348 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 SLC35F2Q8IXU6 374 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 SVBPQ8N300 66 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 OR10AC1Q8NH08 325 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 OR4C3Q8NH37 302 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 SGK3Q96BR1 496 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 MOAP1Q96BY2 351 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 RBM18Q96H35 190 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 ARL5BQ96KC2 179 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM138Q9NPI0 162 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF223Q9UK11 482 aaPredicted RBP11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 A0A1B0GUH1 482 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 C11orf98E9PRG8 122 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 GOSR2O14653 212 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 SMIM6P0DI80 62 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 IFNGR1P15260 489 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 PLAURQ03405 335 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 DUSP8Q13202 625 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF124Q15973 351 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 ACER2Q5QJU3 275 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF425Q6IV72 752 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 LEG1Q6P5S2 330 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 PPP1R14AQ96A00 147 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF75AQ96N20 296 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 OR2A5Q96R48 311 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM231Q9H6L2 316 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 IL23AQ9NPF7 189 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 C2orf42Q9NWW7 574 aa11.37□□□□□ -0.59
PRPF40B-202ENST00000380281 PLPP2O43688 288 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 GATCO43716 136 aaKnown RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 IFNGP01579 166 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 IGHV2-70P01814 119 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 AQP2P41181 271 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 NANOS3P60323 173 aaKnown RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 C11orf88Q6PI97 169 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 CMIPQ8IY22 773 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 SPAG16Q8N0X2 631 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 OR2L13Q8N349 312 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 SYNPRQ8TBG9 265 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 THEM6Q8WUY1 208 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 MAP3K3Q99759 626 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 OR51M1Q9H341 326 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 MED17Q9NVC6 651 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 PRR32B1ATL7 298 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 PRICKLE3O43900 615 aaPredicted RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 NUDT14O95848 222 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 IGKV1D-16P01601 117 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 CNR1P21554 472 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 CSF2RBP32927 897 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 BLOC1S1P78537 153 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 GUCA2AQ02747 115 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 GPM6BQ13491 265 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM44Q2T9K0 475 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM69Q5SWH9 247 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 SPICQ8N5J4 248 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 BRIX1Q8TDN6 353 aaKnown RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 CNN2Q99439 309 aaKnown RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 WDR13Q9H1Z4 485 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 BARX1Q9HBU1 254 aaPredicted RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 OR2A4O95047 310 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 ZFPL1O95159 310 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 SRMP19623 302 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 MAOAP21397 527 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 SLC6A6P31641 620 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 RORAP35398 523 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 RPS15AP62244 130 aaKnown RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 MICBQ29980 383 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 CCDC157Q569K6 752 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 H3F3CQ6NXT2 135 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 LRRC69Q6ZNQ3 347 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 NDUFAF7Q7L592 441 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 CAMKVQ8NCB2 501 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 OR1S2Q8NGQ3 325 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 ADAD1Q96M93 576 aaKnown RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 OR2A7Q96R45 310 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 KLHDC3Q9BQ90 382 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 RAB11FIP5Q9BXF6 653 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms