RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ZNF295-AS1Q8N0V1 137 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 ARIH2OSQ8N7S6 290 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 OR6N1Q8NGY5 312 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 PYDC1Q8WXC3 89 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 LRTOMTQ8WZ04 291 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 HSD17B8Q92506 261 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 ZNF837Q96EG3 531 aaPredicted RBP16.47■□□□□ 0.23
SSU72-203ENST00000378725 ALKBH3Q96Q83 286 aaPredicted RBP16.47■□□□□ 0.23
SSU72-203ENST00000378725 BDH2Q9BUT1 245 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 POLDIP3Q9BY77 421 aaKnown RBP16.47■□□□□ 0.23
SSU72-203ENST00000378725 OR52D1Q9H346 318 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 CRLF2Q9HC73 371 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 B3GAT2Q9NPZ5 323 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 IL20Q9NYY1 176 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 CIB4A0PJX0 185 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 H3BNX3 289 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 RAD51DO75771 328 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 TXNDC12O95881 172 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 APEHP13798 732 aaKnown RBP16.46■□□□□ 0.23
SSU72-203ENST00000378725 ACVR1BP36896 505 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 ARHGDIAP52565 204 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 ZNF133P52736 654 aaPredicted RBP16.46■□□□□ 0.23
SSU72-203ENST00000378725 CEACAM16Q2WEN9 425 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 TIMM23BQ5SRD1 257 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 C1QTNF12Q5T7M4 302 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 C9orf135Q5VTT2 229 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 GPR139Q6DWJ6 353 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 HS3ST5Q8IZT8 346 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 CLDN22Q8N7P3 220 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 OR5K1Q8NHB7 308 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 FANK1Q8TC84 345 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 HDAC2Q92769 488 aaKnown RBP16.46■□□□□ 0.23
SSU72-203ENST00000378725 GTPBP3Q969Y2 492 aaKnown RBP16.46■□□□□ 0.23
SSU72-203ENST00000378725 KCNK17Q96T54 332 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 NIPSNAP1Q9BPW8 284 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 MED18Q9BUE0 208 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 GRHPRQ9UBQ7 328 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 IL20RAQ9UHF4 553 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 ADAM18Q9Y3Q7 739 aa16.46■□□□□ 0.23
SSU72-203ENST00000378725 FREM1Q5H8C1 2179 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 A6NIZ1 184 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 OR5H1A6NKK0 313 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 IMPA2O14732 288 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 ARPC3O15145 178 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 TP53P04637 393 aaPredicted RBP16.45■□□□□ 0.22
SSU72-203ENST00000378725 PRKACGP22612 351 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 SLC6A6P31641 620 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 SH3BGRP55822 239 aaPredicted RBP16.45■□□□□ 0.22
SSU72-203ENST00000378725 CLRN1P58418 232 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 RAP1BP61224 184 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 RAP1AP62834 184 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 TOP3AQ13472 1001 aaPredicted RBP16.45■□□□□ 0.22
SSU72-203ENST00000378725 TAB1Q15750 504 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 RPL13AP3Q6NVV1 102 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 ZNF627Q7L945 461 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 SSX8Q7RTT4 187 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 AMIGO2Q86SJ2 522 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 C17orf78Q8N4C9 275 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 NOXO1Q8NFA2 376 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 OR1K1Q8NGR3 316 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 MAGEE2Q8TD90 523 aaPredicted RBP16.45■□□□□ 0.22
SSU72-203ENST00000378725 BCL2L2Q92843 193 aaPredicted RBP16.45■□□□□ 0.22
SSU72-203ENST00000378725 MCHR2Q969V1 340 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 MARVELD3Q96A59 401 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 NMD3Q96D46 503 aaKnown RBP16.45■□□□□ 0.22
SSU72-203ENST00000378725 C14orf79Q96F83 325 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 SAMD8Q96LT4 415 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 Q96M85 177 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 ALG12Q9BV10 488 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 ULBP2Q9BZM5 246 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 ZNF226Q9NYT6 803 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 MAGED1Q9Y5V3 778 aaPredicted RBP16.45■□□□□ 0.22
SSU72-203ENST00000378725 CDH10Q9Y6N8 788 aa16.45■□□□□ 0.22
SSU72-203ENST00000378725 SPTAN1Q13813 2472 aaKnown RBP16.44■□□□□ 0.22
SSU72-203ENST00000378725 FAM221AA4D161 298 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 ZNF99A8MXY4 864 aaPredicted RBP16.44■□□□□ 0.22
SSU72-203ENST00000378725 AHCYL1O43865 530 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 ENTPD5O75356 428 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 QDPRP09417 244 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 ANXA8P13928 327 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 HOXB1P14653 301 aaPredicted RBP16.44■□□□□ 0.22
SSU72-203ENST00000378725 CRYGSP22914 178 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 SDHAP31040 664 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 RPS6KA3P51812 740 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 ARF1P84077 181 aaKnown RBP16.44■□□□□ 0.22
SSU72-203ENST00000378725 ANKRD16Q6P6B7 361 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 HIPK1Q86Z02 1210 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 WDR31Q8NA23 367 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 SYT14Q8NB59 555 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 CENPNQ96H22 339 aaPredicted RBP16.44■□□□□ 0.22
SSU72-203ENST00000378725 EGLN3Q9H6Z9 239 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 SLC17A5Q9NRA2 495 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 REV1Q9UBZ9 1251 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 IER3IP1Q9Y5U9 82 aa16.44■□□□□ 0.22
SSU72-203ENST00000378725 UTP20O75691 2785 aaKnown RBP16.44■□□□□ 0.22
SSU72-203ENST00000378725 CASKO14936 926 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 DHHO43323 396 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 IDH3BO43837 385 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 GOSR1O95249 250 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 CDH2P19022 906 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms